Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0921 ATGAGTTATAGTTTTTGGAATCTGCAGAAATTAAAGTATTATATAACAATGGCAACACGGTCATCTGAGCCAGCCACAGAAGAACCTAAGAAGCTTACCAGAGATGAGGTTACTACTGAGTTGAATGAACATAGTTTGCCTCCATTTGACCCTGATGTGCAGAGGATCATATATGGCTTCACTTACTTTAAGCTCAACAACTTCGACAAAAATCTTGAGCTTTACAAAGAACTTGCTCTCCACCAATCCCCAAGGTTTTTGATATTTGCTTGTTCTGACTCTCGAGTGAGTCCTGATGTTATCCTAAACTTTCAACCTGGAGAAGCTTTCTCGGCCCGCAACATTGCTAACATGGTTCCTACATATAATCAGAGGGACAATGGAGTTGGTGCAATAATTGAGTATGCTATCGAAGCTCTTAAGGTATCAAACATTCTGGTAATTGGACATAGTAAGTGTGGTGGAATAAAAAGGCTCATGAGTCACCCAGAGGATGATGATTGGCTGAAAATTGGTTTACCTGCCAAAATCAAGGTTCTGGAAGAACACCCACATGCTAATTTTGAAAAACAATGCGAATTATGTGAAAAGGAGTCAGTGAATAACTCCATAGTGAACCTGAAGACATATCCATTTGTTAAAAAAGGAGTGTGTGACAAGAGTTTGAAGATATTGGGTGGTTACTATGATTTTGTGAATGGAAAATTTGAGCTTTGGGAAGATGAGGTTACTACTGAGTTGAATGAACATAGTTTGCCTCCATTTGACCCTGATGTGCAGAGGATCATATATGGCTTCACTTACTTTAAGCTCAACAACTTCGACAAAAATCCTGAGCTTTACAAAGAACTTGCTCTCCACCAATCCCCAAGGTTTTTGATATTTGCTTGTTCTGACTCTCGAGTGAGTCCTGATGTTATCCTAAACTTTCAACCTGGAGAAGCTTTCTCGGCCCGCAACATTGCTAACATGGTTCCTACATATAATCAGAGGGACAATGGAGTTGGTGCAATAATTGAGTACGCTATAGAAGCTCTTAAGGTATCAAACATTCTGGTAATTGGACATAGTAAGTGTGGTGGAATAAAAAGACTCATGAGTCATCCAGAGGAAGATGATTGGCTGAAAATTGGTTTACCTGCCAAAATCAAGGTTCTGGAAGAACACCCACATGCTAATTTTGAAAAACAATGCGAATTATGTGAAAAGGAGTCAGTGAATAACTCCATAGTGAACCTGAAGACATATCCATTTGTTAAAAAAGGAGTGTGTGACAAGAGTTTGAAGATATTGGGTGGTTACTATGATTTTGTGAATGGAAAATTTGAGCTTTGGGAGTATAATTCTGAATCAATTACCATTCCTTTCTCATCACCAAAATGA 1383 0.3868 MSYSFWNLQKLKYYITMATRSSEPATEEPKKLTRDEVTTELNEHSLPPFDPDVQRIIYGFTYFKLNNFDKNLELYKELALHQSPRFLIFACSDSRVSPDVILNFQPGEAFSARNIANMVPTYNQRDNGVGAIIEYAIEALKVSNILVIGHSKCGGIKRLMSHPEDDDWLKIGLPAKIKVLEEHPHANFEKQCELCEKESVNNSIVNLKTYPFVKKGVCDKSLKILGGYYDFVNGKFELWEDEVTTELNEHSLPPFDPDVQRIIYGFTYFKLNNFDKNPELYKELALHQSPRFLIFACSDSRVSPDVILNFQPGEAFSARNIANMVPTYNQRDNGVGAIIEYAIEALKVSNILVIGHSKCGGIKRLMSHPEEDDWLKIGLPAKIKVLEEHPHANFEKQCELCEKESVNNSIVNLKTYPFVKKGVCDKSLKILGGYYDFVNGKFELWEYNSESITIPFSSPK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0921 460 SMART Pro_CA_2 79 240 IPR001765 GO:0004089|GO:0008270
Lal17g0921 460 SMART Pro_CA_2 285 446 IPR001765 GO:0004089|GO:0008270
Lal17g0921 460 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 340 360 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0921 460 SUPERFAMILY beta-carbonic anhydrase, cab 46 243 IPR036874 GO:0004089|GO:0008270
Lal17g0921 460 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 91 98 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0921 460 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 134 154 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0921 460 PANTHER CARBONIC ANHYDRASE 31 242 - -
Lal17g0921 460 PANTHER CARBONIC ANHYDRASE 241 450 - -
Lal17g0921 460 SUPERFAMILY beta-carbonic anhydrase, cab 253 451 IPR036874 GO:0004089|GO:0008270
Lal17g0921 460 Gene3D Carbonic anhydrase 47 249 IPR036874 GO:0004089|GO:0008270
Lal17g0921 460 Gene3D Carbonic anhydrase 254 454 IPR036874 GO:0004089|GO:0008270
Lal17g0921 460 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 297 304 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0921 460 PANTHER CARBONIC ANHYDRASE 241 450 IPR001765 GO:0004089|GO:0008270
Lal17g0921 460 PANTHER CARBONIC ANHYDRASE 31 242 IPR001765 GO:0004089|GO:0008270
Lal17g0921 460 Pfam Carbonic anhydrase 293 441 IPR001765 GO:0004089|GO:0008270
Lal17g0921 460 Pfam Carbonic anhydrase 87 235 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0921 Lal-Chr17 7284957 7306739 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0921 K01673 - dct:114580706 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1888 13 18374354 18378477 Lal17g0921 17 7284957 7306739 ECH
Lal24g1441 24 15681019 15684588 Lal17g0921 17 7284957 7306739 ECH
Lal17g0921 17 7284957 7306739 Lal17g0921 17 7284957 7306739 ECH