Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1136 ATGGATGTGGAATTAGTTCTACCTTCCAAGGATTTGTTGAAATGTTGCAATTGCGGATGTAGTTGTTCTTTGGCAGCTCAGTCTTCGGGGACTTGGTTGCGTTCTGTTAAACGGAAGCACGATGAATTTGAGCTGGATAGTCGATTACGTGTGCCTATGTTTGCACAGATTGGGATTGAAAATGAGTGCATGGCCTTGCGTGAGATGGTTAGCAGTCAGCAGAAAACTATAGAAGATTTGATTGCTGAATTGGAGGAGGAGAGAAATTCTGCATCCACAGCTGCAAATGAGGCAATGTCGATGATGTTGAGGTTGCAGAGGGAGAAGGCAGAGATTCAAATGGAATCCCGACAATTCAAGTGTTTTGTAGAGGAGAAAATGAAACATGATCAGGAGGAGTTTTTATCATTTGAGGATTTGTTGTATAAGAGGGAACAGACTATCCAGTCACTGACTTGTGAAGTTCAGGCATATAAGCACCGGATGATGAGTTTTGGGCTCACCGAGGAAGAGGCGGAAGGTGAGCAATATGAACTTTCCACCTATGAATACCCTGCTTTGAAATGCGATGTGTTGCATGGTGTCATGGATGCTGATAATGATTATACAGATATCGAGAAATATGCATTTGGTGAAAATCCTAGTGACCATTTGAGGAACTTGGAAAAAAGGATCTTTCAAATGGAGAGAAGTCCAACTTACAGCCAGATGGATGGGGATTTTACAGGAAAAAATACTTTTGAGAAGGTGATTGTTGGACACTCTCCAAGACGGAGAAGACATTCCAGGAAATTTTCCTCTGACTCAACTTCATTTGGTGGGATGGGTAGAGAAACCGGTCCTGAGTTTCAGATGGATTCTCCCAAGGTCAATAATAACTCTAGGAAAGACAATTTCTCTCACTCAGATGATCCTTCCAATTTGAAGAAGGAAGATAAGGCATCAGAAAGTGATGACACGAGTGACAGAATTTATACAGTTGACTTTGTTCAAGTTGGGGCACCGGATAATGGTTTCACAGAATCCAAGGCTCGAGCCGGTGCCTTTGAAGATTATGCAACCTCACCAAGGGAGTCAGGGAATAATGCTGATTTTGAAGATCCTGACATAAAGAAGCTTTACATGAGGCTTCATGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCGATCATTTCAATGAGCACAGATAAAGCACAGTTTGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAAATGTCGCCGGAAAGACAAATGACTGTGAGGAAGCCCTCTATTGTCGGCAGCTTTTCATTCTTTTCAATTTTTAAGTGGATCATATCAGTTGTTTTCTGGAGAAAGAGAGCTCATCAAAGCAAGTATATGTTCGAAGTACCTGCCGATAGTATGGGCTTGCTGCTACTCCTAGACAAGGAAACACATGCAACACCATGGAGATGTATTTCAAGTACACAAGTGGGAGATTAG 1473 0.4216 MDVELVLPSKDLLKCCNCGCSCSLAAQSSGTWLRSVKRKHDEFELDSRLRVPMFAQIGIENECMALREMVSSQQKTIEDLIAELEEERNSASTAANEAMSMMLRLQREKAEIQMESRQFKCFVEEKMKHDQEEFLSFEDLLYKREQTIQSLTCEVQAYKHRMMSFGLTEEEAEGEQYELSTYEYPALKCDVLHGVMDADNDYTDIEKYAFGENPSDHLRNLEKRIFQMERSPTYSQMDGDFTGKNTFEKVIVGHSPRRRRHSRKFSSDSTSFGGMGRETGPEFQMDSPKVNNNSRKDNFSHSDDPSNLKKEDKASESDDTSDRIYTVDFVQVGAPDNGFTESKARAGAFEDYATSPRESGNNADFEDPDIKKLYMRLHALEADRESMRQAIISMSTDKAQFVLLKEIAQHLCKEMSPERQMTVRKPSIVGSFSFFSIFKWIISVVFWRKRAHQSKYMFEVPADSMGLLLLLDKETHATPWRCISSTQVGD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1136 490 MobiDBLite consensus disorder prediction 251 320 - -
Lal24g1136 490 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 9 465 - -
Lal24g1136 490 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Lal24g1136 490 MobiDBLite consensus disorder prediction 296 320 - -
Lal24g1136 490 PANTHER BNAANNG28530D PROTEIN 9 465 - -
Lal24g1136 490 Coils Coil 67 115 - -
Lal24g1136 490 Coils Coil 370 390 - -
Lal24g1136 490 Pfam Zein-binding 65 155 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1136 Lal-Chr24 12212571 12216590 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1136 - - aprc:113872114 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1274 13 11342290 11345786 Lal24g1136 24 12212571 12216590 LSH
Lal1g1718 1 19598543 19601437 Lal24g1136 24 12212571 12216590 PCT
Lal20g0212 20 1503234 1505207 Lal24g1136 24 12212571 12216590 PCT
Lal24g1136 24 12212571 12216590 Lal1g1718 1 19598543 19601437 PCT
Lal24g1136 24 12212571 12216590 Lal20g0212 20 1503234 1505207 PCT