Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1274 ATGTTGATTTTGAATATGGATTTAGGTCCATCTTCCAAGGATTTGTTGAAATGTTGCAATTGTGATTATAGTTGCTCCTCGGCAGCTCAATCCTCAGGGTCTTGGATTCGTTCTGTTAAACGAAAACACGATGAGTTCGAGCTCGATAGCGGTTTGGTTGTGCCTGAGTTTGCACGGATTGGGATTGAGAATGAATGTGTAGCCTTACGCGAAATGGTTAGCAGTCAGCAGAAAACTATACAAGATTTGAATGATGAATTGGAGGAGGAGAGAAATTTTGCATCCACGGCCGCGAATGAGGCAATGTCGATGATAGTGAGGTTGCAAAGGGAGAAGGCAGAGATTCAAATGGAAGATCGTCAATTCAAGCGTTATGCCGAGGAGAAGATGTCACATGATCAAGAGGAGTTGTTATCTTTGGAGGATTTGTTGTATAAGAGAGAACAGATAATTCAGTCACTTACTTGTGAAGTTCAGGCTTATAAGCACAGAATTATGAGTTTTGGTTTCACCGAGGAAGAGGCCGAAGGTGAGCAATATGAAATTGCTACCTATGAATACCCTCCTTTGAAATGTAATGTGACGCATGGAAACGTGGATGGTGATAATGATGGCGCAGATGTTGAGAAATATGCATTTGGTGAAACTCCTATTAACCGTTTGAGGAACTTGGAAAATAGGATCTCTCAAATGGAAAGAAGTCCAACTTACAGCCAGATGGATGCGGATTTTACGGGAAAAAATACTTTGGAGAAAGTGATTGTTGGACACTCTCCGAGACGGACGATACATTCCAGGAAATTTTCCTCAGAATCAACTTCATTTGGTGGGATGGTTAGAGAAACAGGTCCTGAGTTTCAGATGGATTCTCCGAAGGTCAATAATAACTTGAGGAAAGATTATTTCTCTCAGTCAGAGGACCCTTCCAATTTGAAGAAGGTAGATAAAGCATCAGAAAGTGACGACACCAGTGACATAATTTATTCAGTTGATTCTGTTCAAGTTGGGGCAGCACATAATGGTTTCACCGATTTTACAACCTCGCCGAGGGAGTCAGGGAATAATGCTGATTTTGAAGATCCCTACATAAAGAAGCTTTACATGAGGCTTCATGCACTTGAGGCTGATAGGGAATCAATGAAGCAGGCTATCATTTCAATGAGCGCAGATAAAGCACAGCTTGTGTTACTGAAGGAAATAGCTCAGCATTTGTGCAAAGAGAAGGCACCAGAAAGAAAAATGACTGTGAGGAAGCCCTGTAATGTTGGCAGCTTTTCATTCTTTTCAATTTTTAAGTGGATCACATCAGTTGTTTTCTGGAGAAAGAGAGCTCATCAAAGCAAGTATATGTTCGATCTACCAGCTGACAGTAGGGGCTTGTTGCTACTCCTAGACAAGGGAACGCGTGCAAGGCCATGGAGGTGTATTTCAAGTACACAAGTGGGAGATTAG 1452 0.418 MLILNMDLGPSSKDLLKCCNCDYSCSSAAQSSGSWIRSVKRKHDEFELDSGLVVPEFARIGIENECVALREMVSSQQKTIQDLNDELEEERNFASTAANEAMSMIVRLQREKAEIQMEDRQFKRYAEEKMSHDQEELLSLEDLLYKREQIIQSLTCEVQAYKHRIMSFGFTEEEAEGEQYEIATYEYPPLKCNVTHGNVDGDNDGADVEKYAFGETPINRLRNLENRISQMERSPTYSQMDADFTGKNTLEKVIVGHSPRRTIHSRKFSSESTSFGGMVRETGPEFQMDSPKVNNNLRKDYFSQSEDPSNLKKVDKASESDDTSDIIYSVDSVQVGAAHNGFTDFTTSPRESGNNADFEDPYIKKLYMRLHALEADRESMKQAIISMSADKAQLVLLKEIAQHLCKEKAPERKMTVRKPCNVGSFSFFSIFKWITSVVFWRKRAHQSKYMFDLPADSRGLLLLLDKGTRARPWRCISSTQVGD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1274 483 ProSiteProfiles GTD-binding domain profile. 64 162 IPR007656 -
Lal13g1274 483 Coils Coil 363 383 - -
Lal13g1274 483 Pfam Zein-binding 68 158 IPR007656 -
Lal13g1274 483 PANTHER BNAANNG28530D PROTEIN 6 458 - -
Lal13g1274 483 Coils Coil 66 128 - -
Lal13g1274 483 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 6 458 - -
Lal13g1274 483 MobiDBLite consensus disorder prediction 273 318 - -
Lal13g1274 483 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1274 Lal-Chr13 11342290 11345786 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1274 - - aprc:113872114 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1274 13 11342290 11345786 Lal13g1274 13 11342290 11345786 ECH
Lal13g1274 13 11342290 11345786 Lal24g1136 24 12212571 12216590 LSH
Lal1g1718 1 19598543 19601437 Lal13g1274 13 11342290 11345786 PCT
Lal20g0212 20 1503234 1505207 Lal13g1274 13 11342290 11345786 PCT
Lal13g1274 13 11342290 11345786 Lal1g1718 1 19598543 19601437 PCT
Lal13g1274 13 11342290 11345786 Lal20g0212 20 1503234 1505207 PCT