Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1718 ATGGATACAGAATCATCTGTTGATTTGGTAAAAAATTTCAAATGTTGTGAGTGTGGATGTGATTGCTCAATGGCGGCGAAAAGGAAGCATGATGATTCGGAACAAGAAGGTATGGATTGCGATTCAATCGTGCGAGTTGAGATGGGAGATGAATGTGCTGCTTTGCGCGAGGCAGTGAGCAATCAACAACAAGCTATACAAGATTTGTATGCTGAATTGGAGGAGGAAAGGAATGCTTCCTCCTCGGCCGCCAATGAGGCAATGTCCATGATACTGAGGTTGCAGAGGGAGAAGGCGCAACTTCAAATGGAAGCAAAGCAATTCAAACGTTTCGTGGAGGAGAGGACTTCACATGATCAGCAGGAGCTTTTAGTTTTGGAGGATTTGTTGTATCAAAGAGAACAGATGATTCAGTCGCTAACATGTGAAATTCAAGCTTATAAGCATCGGTTGATGAGTTTTGGCTTCACTGAGTCGGAGGCGGATGAAATTCCCCCATATGAGTACCCTCCTTTGAGATGTAATGTAATGCATGATGTGATGGATGCTGATAATGATGACACGGATATTGAAAAATACGCATTCGGGGAAACTCCTAGAGACCGTGTGAAGAACTTCAAAAATAGGATCACTCAACTGGAGACAAGTCCAACTTATAGCCAGATGGAGGGGGATTTAACCGGAAAAAGTGTTTTAGACAAAGTGGTGGTTGGACAATCTCCAAGATGGACTAAGCATTCAAGGAGATTTTCCTCGGACTCGACTTCATTTTGCCCTGAGCTTCTAATGGATTCTCCAAGGCTCAATAGTAGCTTTATGAAGATAGATGAGGAACATTCCAATTTGAAAAGGGGAGATAATGCATCGGAAGCTGGCGATGATATGAGTGACACACGAGTTTATACAATTGACTATGCTAATAATGGGGCACCATATAATGGTTCAACAGAATTCAAAGCTGGGGGTGGTGTATTTGATGAGTATGGAACCACTCCAAGGGAGTTAGGGTATAATGCAGATTTTGAAGATCCATATGCGAAGAAGCTTTACATGAGGCTTCAGGCACTTGAAGCTGATCGGGAATCGATGAGACAGACAATCATTTCAATGCGTACCGATAAAGCACAGATTGTTTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCAATGCAAAGAAAAAAGACAGTGAGAAAGCAATCTTTTGTTGCCCAATTGCCTTTCCTGACATTTTTTAAGTGGATTACGTCAATCATTTTCTGGAGAAGAAAAGCTAATGATATGAATTTTGCAACAACACCAGCATTAAGTGCAATAATGATGACCCTAATGGAAATACAAGTACATGTTTGGGCTACCATCCGACAACGATGGCTTATATTTACTCATCAACAAGGAACACGGCGTAAGGCCATGGAGATATCTTACAAGTACACAATTGGGAGATTAGTTCTCCGGTTTCCTGTGTCGTCATCTTACAGGGTAGGCTCATTTGCGTGA 1506 0.4177 MDTESSVDLVKNFKCCECGCDCSMAAKRKHDDSEQEGMDCDSIVRVEMGDECAALREAVSNQQQAIQDLYAELEEERNASSSAANEAMSMILRLQREKAQLQMEAKQFKRFVEERTSHDQQELLVLEDLLYQREQMIQSLTCEIQAYKHRLMSFGFTESEADEIPPYEYPPLRCNVMHDVMDADNDDTDIEKYAFGETPRDRVKNFKNRITQLETSPTYSQMEGDLTGKSVLDKVVVGQSPRWTKHSRRFSSDSTSFCPELLMDSPRLNSSFMKIDEEHSNLKRGDNASEAGDDMSDTRVYTIDYANNGAPYNGSTEFKAGGGVFDEYGTTPRELGYNADFEDPYAKKLYMRLQALEADRESMRQTIISMRTDKAQIVLLKEIAQHLCKEMSMQRKKTVRKQSFVAQLPFLTFFKWITSIIFWRRKANDMNFATTPALSAIMMTLMEIQVHVWATIRQRWLIFTHQQGTRRKAMEISYKYTIGRLVLRFPVSSSYRVGSFA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1718 501 Coils Coil 346 373 - -
Lal1g1718 501 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 440 - -
Lal1g1718 501 Pfam Zein-binding 54 144 IPR007656 -
Lal1g1718 501 ProSiteProfiles GTD-binding domain profile. 50 148 IPR007656 -
Lal1g1718 501 Coils Coil 52 111 - -
Lal1g1718 501 PANTHER BNAANNG28530D PROTEIN 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1718 Lal-Chr1 19598543 19601437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1718 - - gmx:100797605 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1718 1 19598543 19601437 Lal1g1718 1 19598543 19601437 ECH
Lal1g1718 1 19598543 19601437 Lal20g0212 20 1503234 1505207 LSH
Lal1g1718 1 19598543 19601437 Lal13g1274 13 11342290 11345786 PCT
Lal1g1718 1 19598543 19601437 Lal24g1136 24 12212571 12216590 PCT
Lal13g1274 13 11342290 11345786 Lal1g1718 1 19598543 19601437 PCT
Lal24g1136 24 12212571 12216590 Lal1g1718 1 19598543 19601437 PCT