Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0291 ATGAAGCTTCGGAGATCTTCCTTGTGTTTCTTTCTAGGGTTTATGTTGCTATCCTTTGCGCCGTCGTCAATGGCGAGATTCGTGGTGGAGAAGAACAGTTTGACGGTGACTTCGCCGGAGAAGATCAAAGGAACGCACGACAGTGCGATTGGGAACTTTGGGATACCCCAATACGGTGGCAGCATGGCTGGGAACGTGGTATTCCCAAAGGATAATCAAAAGGGTTGCAAGGAGTTTGATGAGTTTGGGATTTCTTTCAAATCCAAGCCTGGTGCTCTTCCCACCATCGTTTTGCTCGACCGTGGAAATTGCTTTTTTGCTTTGAAAGTTTGGAATGCACAGAAAGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGATATTGAAGAGAACTTAATAACTATGGACACACCTGAAGAGGATGGATCAACTGCAAAATACATAGAGAACATAACAATACCATCAGCTCTCATTGGAAAAAGTTTTGGTGAAAACTTAAAGAATGCATTAAGTGGTGGGGATATGGTCAACATAAATCTTGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTAGAGTATGAATTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTCAAGGATTTTAAAGGTGCAGCACAAATACTAGAGAAAGGTGGTTACACTCAGTTTACACCCCATTACATAACTTGGTACTGTCCTCAGGCATTCACATTAAGCAAACAGTGCAAGTCACAGTGCATAAATCACGGACGATACTGTGCTCCGGATCCTGAGCAGGACTTTAGCTCTGGTTATGATGGGAAAGATGTGGTTATTGAGAATCTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTAACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGGAATGTGCAGATGCCGTCATTAATTCACTTGGCCTTGATCTTAAAAATATTGAAAGATGCATGGGAGATCCTAATGCTGATTCTGAAAATCCCGTGTTGAAAGAAGAGCAAGATGCCCAAGTTGGGAAGGGGTCACGAGGTGATGTTACCATTTTGCCCACTCTTGTCGTCAATAATCGACAGTATCGAGGAAAACTGGAGAAAGGTGCTGTTGCAAAAGCCATTTGTTCTGGGTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAATGATGTGGAGACAAATGAGTGCTTGGATAAAAATGGTGGTTGTTGGCAGGATAAAGCAGCTAACATCACAGCATGCAAGGATACATTCCGTGGGAGAGTATGTGAATGCCCCCTGGTAGATGGTGTGCAATTCAAAGGAGATGGTTATACAACCTGTGAAGCTAGTGGGCCTGGACGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCTCGGAATGGACATGCATTTACTGCTTGTTCGGATAATGGAGAGGTTAAATGCCAGTGTCCTGTAGGGTTTAAAGGAGATGGTGTGAAAAGTTGTGAAGATATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATAACTGCAGCTGTAGCGGGAATCTTCTGTATATCAGGGACCATGACACTTGCATAAGTAAAACTGCCAGTCAGCAGGGAAAATCTGCTTGGACTGCTTTTTGGGTCATTTTAGTTGGCTTAGTTGTGGCTGCTGGCGGGGCGTACCTTGTGTACAAATATAGAATAAGGTCATACATGGATTCTGAAATCAGAGCCATCATGGCACAGTATATGCCCTTGGACAGCCAAGAAGGAGTTGTAAATCATGTCAATGAAGAAAGAGCATGA 1893 0.4337 MKLRRSSLCFFLGFMLLSFAPSSMARFVVEKNSLTVTSPEKIKGTHDSAIGNFGIPQYGGSMAGNVVFPKDNQKGCKEFDEFGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEENLITMDTPEEDGSTAKYIENITIPSALIGKSFGENLKNALSGGDMVNINLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVINSLGLDLKNIERCMGDPNADSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVAKAICSGFEETTEPAVCLSNDVETNECLDKNGGCWQDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFTACSDNGEVKCQCPVGFKGDGVKSCEDIDECKEKKACQCPECSCKNTWGSYNCSCSGNLLYIRDHDTCISKTASQQGKSAWTAFWVILVGLVVAAGGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQEGVVNHVNEERA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0291 630 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 16 609 - -
Lal24g0291 630 Gene3D Laminin 411 467 - -
Lal24g0291 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Lal24g0291 630 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 609 - -
Lal24g0291 630 Pfam PA domain 64 165 IPR003137 -
Lal24g0291 630 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Lal24g0291 630 Gene3D Laminin 523 560 - -
Lal24g0291 630 SUPERFAMILY PA domain 48 174 IPR046450 -
Lal24g0291 630 SMART egfca_6 518 560 IPR001881 GO:0005509
Lal24g0291 630 CDD PA_VSR 52 179 - -
Lal24g0291 630 Gene3D Laminin 469 522 - -
Lal24g0291 630 Gene3D - 24 188 - -
Lal24g0291 630 CDD EGF_CA 518 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0291 Lal-Chr24 2098314 2103913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0291 25 630 Miscellaneous Gene Families AT2G14740 84.488 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0291 - - gmx:100803958 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0291 24 2098314 2103913 Lal24g0291 24 2098314 2103913 ECH
Lal12g0381 12 2702565 2708090 Lal24g0291 24 2098314 2103913 LSH
Lal13g0370 13 2319552 2323820 Lal24g0291 24 2098314 2103913 LSH
Lal23g1640 23 16147860 16152748 Lal24g0291 24 2098314 2103913 PCT
Lal24g0291 24 2098314 2103913 Lal23g1640 23 16147860 16152748 PCT