Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0381 ATGAAGTTTCGGATATCTTCCCTCTGTTTATTCCTAGGGTTTCTATTGTTTTCCTTTGCGCCGTCGTCAATGGCGAAATTCATGGTGGAGAAAAACAGCTTGACGGTGACGTCGCCGGATAAGATCAAGGGAAATTATGACAGCGCGATTGGGAACTTTGGGATACCCCAATACGGAGGTAGCATGACTGGTAATGTGGTGTTCCCAAAGGATAATCAAAGGGGTTGCAAAGAGTTCGATGAGTATGGGATTTCTTTCAAATCCAAGCCTGGTGCACTTCCCGTCATCGTTTTGCTCGATCGTGGACATTGCTTTTTTGCTTTGAAAGTCTGGAATGCCCAGAAAGCTGGAGCTTCTGCTGTTCTTCTTGCAGATGATAGAAAAGAAAAATTAATAACTATGGACACACCTAAAGAGGATGGATCAAGTGCAGAATACATACAGAACATAACAATACCATCAGCCCTCATTGAAAAACGTTTTGGTGAAAACTTGAAGAGTGCCATTAATGGTGGGGATATGGTCAACATAAATCTTGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTGGAATATGAGTTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATAAATTTTGTGAAGGATTTTAAGAGCTCGGCACAAATGCTAGAGAAAGGTGGTTACACTCAGTTTACACCTCATTACATAACTTGGTACTGTCCTAAAGCATTCACATTAAGCAAACAGTGTAAGTCCCAGTGCATAAATCACGGAAGATATTGTGCTCCGGATCCTGAGAAGGATTTCAGCTCTGGTTATGATGGAAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAGTACAACAAGGAATGTGCAGATGCTGTCATTAATTCACTTGGTCTTGATCTTAAAAAGATTGAAAGGTGCATGGGAGATCCAAATGCTGATTCTGAAAATCCTTTATTGAAAGAAGAGCAAATTGCCCAAGTTGGGAAGGGAGCACGAGGTGATGTTACCATATTGCCCACTCTTGTTATCAATAATCGACAGTATCGAGGAAAACTGGAGAAGGGTGCTGTTTTAAAAGGCATTTGTTCTGGGTTTGAAGAAACTACTGAACCAGCTGCTTGTTTGAGCAGCGATGTGGAGACAAATGAGTGCTTGGATAACAACGGTGGTTGTTGGCAGGATAAAGCAGCTAACATCACAGCATGCAAGGATACATTCCGTGGGCGAGTGTGTAAATGCCCCCTGGTAGATGGTGTACAATTCAAAGGAGATGGTTATAAAACTTGTGAAGCTAGCGGTTCTGGACGGTGCAAGATAAACAATGGAGGTTGCTGGCATGAAGCCCGAAATGGAAATGCATTTACTGCTTGCTTGGATAATGGAGAGGTCAAATGCAAGTGTCCTCTAGGGTTTAAAGGAGATGGTGTCAAAAGTTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAGTGTAGCTGCAAGAATACTTGGGGCAGCTATAACTGCAGTTGTAGCAGGGATCTTCTGTATATCAAGGAGCACGACACTTGCATAAATAAAACTGCCATTCCACAGGGAAAATCTGTTTGGTCTGCTTTTTGGGTCCTTTTAGTTGGTTTGGCCATGGCTGCTGGCGGGGCGTACCTTGTGTACAATTATAGAATAAGGTCATACATGGATTCTGAAATCAGAGCCATCATGGCACAGTATATACCCTTGGACGGCCAAGAAGGAGTTTTAAATCATGTCAATGAAGAAAGAGCATGA 1893 0.4247 MKFRISSLCLFLGFLLFSFAPSSMAKFMVEKNSLTVTSPDKIKGNYDSAIGNFGIPQYGGSMTGNVVFPKDNQRGCKEFDEYGISFKSKPGALPVIVLLDRGHCFFALKVWNAQKAGASAVLLADDRKEKLITMDTPKEDGSSAEYIQNITIPSALIEKRFGENLKSAINGGDMVNINLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLINFVKDFKSSAQMLEKGGYTQFTPHYITWYCPKAFTLSKQCKSQCINHGRYCAPDPEKDFSSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVINSLGLDLKKIERCMGDPNADSENPLLKEEQIAQVGKGARGDVTILPTLVINNRQYRGKLEKGAVLKGICSGFEETTEPAACLSSDVETNECLDNNGGCWQDKAANITACKDTFRGRVCKCPLVDGVQFKGDGYKTCEASGSGRCKINNGGCWHEARNGNAFTACLDNGEVKCKCPLGFKGDGVKSCEDIDECKEKKACQCPECSCKNTWGSYNCSCSRDLLYIKEHDTCINKTAIPQGKSVWSAFWVLLVGLAMAAGGAYLVYNYRIRSYMDSEIRAIMAQYIPLDGQEGVLNHVNEERA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0381 630 Gene3D Laminin 523 560 - -
Lal12g0381 630 SUPERFAMILY PA domain 33 174 IPR046450 -
Lal12g0381 630 CDD PA_VSR 52 179 - -
Lal12g0381 630 Pfam PA domain 63 165 IPR003137 -
Lal12g0381 630 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 609 - -
Lal12g0381 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Lal12g0381 630 Gene3D Laminin 411 467 - -
Lal12g0381 630 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 16 609 - -
Lal12g0381 630 CDD EGF_CA 518 546 - -
Lal12g0381 630 Gene3D Laminin 469 522 - -
Lal12g0381 630 Gene3D - 24 188 - -
Lal12g0381 630 SMART egfca_6 518 560 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0381 Lal-Chr12 2702565 2708090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0381 25 630 Miscellaneous Gene Families AT2G14740 79.373 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0381 - - gmx:100803958 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0381 12 2702565 2708090 Lal12g0381 12 2702565 2708090 ECH
Lal12g0381 12 2702565 2708090 Lal13g0370 13 2319552 2323820 LSH
Lal12g0381 12 2702565 2708090 Lal24g0291 24 2098314 2103913 LSH
Lal23g1640 23 16147860 16152748 Lal12g0381 12 2702565 2708090 PCT
Lal12g0381 12 2702565 2708090 Lal23g1640 23 16147860 16152748 PCT