Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0370 ATGGCTGGTAACGTGGTTTTCCCAAAGGATAATCAAAATGGTTGCAAGGAGTTCGATGAGTTTGGGATTTCCTTCAAATCCAAGCCTGGTGCTCTTCCCGTCATTGTTTTGCTCGATCGTGGAAATTGTTTTTTTGCTTTGAAAGTCTGGAATGCCCAGAAAGCTGGAGCTTCTGCTGTTCTTGTTGCAGATAATATTGACGAGAACTTAATAACTATGGACACACCTGAAGAGGATGGATCAGCCGCAAAATACGTAGAGAACATAACAATACCGTCTGCTCTCATTGAAAAAAGTTTTGGCGAAAAATTAAAGAATGCCATAAGTGGTGGAGAGTATGAGTTGTGGACCAATACCGTCCCCCATCCAGACGCTCGTGTAGAGTATGAGTTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTTTGAAAGATTTTAAGTGTGCAGCACAAATACTAGAGAAAGAAGGTTACACTCAATTTACACCCCATTACATAACTTGGTACTGTCCTCATGCATTCACATTAAGCAAACAGTGCAAGTCCCAGTGCATAAATCACGGAAGGTATTGTGCTCCAGATCCTGAGCAAGACTTCAGCTCTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCTAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTAACAGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGGAATGTGCAGATGCTGTCATTAATTCACTTGGTCTTGATCTTAAAAAGATTGAAAGGTGCATGGGAGATCCTAATGCTGATTCTGAAAATCCTGTATTGAAAGAAGAGCAAGATGTCCAAGTTGGGAAAGGATCACGAGGTGATGTTACCATATTGCCCACTCTTGTTGTCAATAATCGGCAATATCGAGGAAAACTGGAGAAAGGTGCTGTCGCAAAAGCAATTTTTTCTGGGTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGTAGTGATGTGGAGACAAATGAGTGCTTGAACAACAATGGTGGTTGTTGGCAGGATACATTCCGTGGGAGATTATGTGAGTGCCCCCTGGTAGATGGTGTGCAATTCAAAGGAGATGGTTATACAACCTGTGAAGCTAGTGGGCCTGGACGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAACCCGGAATGGACATGCATTCACTGCTTGTTCAGATAATGGAAAGGTTAAATGCCAGTGTCCTGTAGGATTTAAAGGAGACGGTGTCAAAAGTTGCGAAGACATTGATGAATGTAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGGAGCGGGATCTTCTGTAAAACTGCCAGTCAGCAGGGAAAATCTGCATGGACTGCTTTATGGGTCATTTTTATTGCCTTGGTTGTGGCTGCTGGTGGAGCATACCTCGTGTACAAATATAGAATAAGGTCATACATGGATTCTGAAATCAGAGCCATCATGGCACAGTATATGCCCTTGGACAACCAAGAAGGAGTTGTAAATCATGTTAATGAAGAAAGAGCATGA 1620 0.4191 MAGNVVFPKDNQNGCKEFDEFGISFKSKPGALPVIVLLDRGNCFFALKVWNAQKAGASAVLVADNIDENLITMDTPEEDGSAAKYVENITIPSALIEKSFGEKLKNAISGGEYELWTNTVPHPDARVEYELWTNSNDECGVKCDMLMEFLKDFKCAAQILEKEGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFSSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVINSLGLDLKKIERCMGDPNADSENPVLKEEQDVQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVAKAIFSGFEETTEPAVCLSSDVETNECLNNNGGCWQDTFRGRLCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHETRNGHAFTACSDNGKVKCQCPVGFKGDGVKSCEDIDECKEKKACQCPECSCKNTWGSGIFCKTASQQGKSAWTALWVIFIALVVAAGGAYLVYKYRIRSYMDSEIRAIMAQYMPLDNQEGVVNHVNEERA 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0370 539 SUPERFAMILY PA domain 19 123 IPR046450 -
Lal13g0370 539 Pfam Complement Clr-like EGF-like 426 446 IPR026823 -
Lal13g0370 539 Gene3D Laminin 397 477 - -
Lal13g0370 539 Pfam PA domain 2 104 IPR003137 -
Lal13g0370 539 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 1 518 - -
Lal13g0370 539 Gene3D - 1 123 - -
Lal13g0370 539 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0370 Lal-Chr13 2319552 2323820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0370 1 539 Miscellaneous Gene Families AT2G14740 76.450 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0370 - - gmx:100803958 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0370 13 2319552 2323820 Lal13g0370 13 2319552 2323820 ECH
Lal12g0381 12 2702565 2708090 Lal13g0370 13 2319552 2323820 LSH
Lal13g0370 13 2319552 2323820 Lal24g0291 24 2098314 2103913 LSH
Lal23g1640 23 16147860 16152748 Lal13g0370 13 2319552 2323820 PCT
Lal13g0370 13 2319552 2323820 Lal23g1640 23 16147860 16152748 PCT