Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0186 ATGGATATAATAATAACAAGCATGGTAGCTGAGAAGGCAGTAGTAATATTCAGCAGGAGCACTTGTTGTTTGTGTCACTCCATCAAGTTACTGATACGTAACTTCGGCGCGAATCCTACTGTTTATGAGCTTGATGAATTGACAAATGGGCAACAGATTGAAAGGGAACTCATTCAAATAGGATGCAAACCAAGTGTTCCAGCTGTGTTTATAGGACAAAAGTTCATAGGTGGCTCTAATAGTATCATGAGCCTTCATAGCAAAGCAAGCTTTTCAAGTCACTTAAACCATAGTGAACATACTCTAACTTTTTCTAATTACTCAAATATTATTCTAGCAATGGATGTGTTGGCAAGGTTAACTGCTGAGAAGCCGGTAGTGATCTTCAGCAAGAGCACTTGTTGCATGAGCCATTCTGTGAAGGCTCTAATATTCAGCTTTGGTGCTAACCCTATGGTTATTGAGGTTGACAAAATAGAAAATGGTGTACAAATAGAGAGTGCACTGGTCCAACTCGGTAGTCGCCCGAGCGTGCCATCAGTGTTCATAGGACAGAAATTTATAGGTGGTGCTGATGAAGTCATAAGCCTCAACATTCAAAACAAGCTTGCCCCGTTGCTTTTAAGTGCAAAAGCTATATTCATCTGGGGTTGA 654 0.4052 MDIIITSMVAEKAVVIFSRSTCCLCHSIKLLIRNFGANPTVYELDELTNGQQIERELIQIGCKPSVPAVFIGQKFIGGSNSIMSLHSKASFSSHLNHSEHTLTFSNYSNIILAMDVLARLTAEKPVVIFSKSTCCMSHSVKALIFSFGANPMVIEVDKIENGVQIESALVQLGSRPSVPSVFIGQKFIGGADEVISLNIQNKLAPLLLSAKAIFIWG 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0186 217 CDD GRX_GRXh_1_2_like 125 206 - -
Lal24g0186 217 ProSiteProfiles Glutaredoxin domain profile. 2 102 - -
Lal24g0186 217 ProSiteProfiles Glutaredoxin domain profile. 114 214 - -
Lal24g0186 217 Gene3D Glutaredoxin 4 109 - -
Lal24g0186 217 Gene3D Glutaredoxin 114 215 - -
Lal24g0186 217 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 114 214 - -
Lal24g0186 217 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 95 - -
Lal24g0186 217 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Lal24g0186 217 PANTHER GLUTAREDOXIN 114 214 IPR011905 -
Lal24g0186 217 SUPERFAMILY Thioredoxin-like 5 96 IPR036249 -
Lal24g0186 217 CDD GRX_GRXh_1_2_like 13 88 - -
Lal24g0186 217 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 97 IPR011905 -
Lal24g0186 217 TIGRFAM GlrX-like_plant: glutaredoxin-like family 118 214 IPR011905 -
Lal24g0186 217 PRINTS Glutaredoxin signature 126 144 IPR014025 -
Lal24g0186 217 PRINTS Glutaredoxin signature 171 184 IPR014025 -
Lal24g0186 217 PRINTS Glutaredoxin signature 185 198 IPR014025 -
Lal24g0186 217 Pfam Glutaredoxin 14 76 IPR002109 -
Lal24g0186 217 Pfam Glutaredoxin 126 188 IPR002109 -
Lal24g0186 217 SUPERFAMILY Thioredoxin-like 114 212 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0186 Lal-Chr24 1335478 1338210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0186 5 98 Miscellaneous Gene Families AT4G15690 50.000 1.39e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0186 K03676 - gmx:100803979 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0186 24 1335478 1338210 Lal24g0186 24 1335478 1338210 ECH
Lal5g0291 5 2588881 2589189 Lal24g0186 24 1335478 1338210 PCT
Lal24g0186 24 1335478 1338210 Lal3g1331 3 19111676 19111993 PCT
Lal24g0186 24 1335478 1338210 Lal5g0290 5 2576797 2581927 PCT