Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0290 ATGGATGCTTTTGCAAGGTTGATAGCAGAAAATCCAGTAGTAATATTCAGCAAGAGTACATGTTGCATGAGTCATACAGTGAAGGCTTTGATATTCAGCTTTGGTGCTAACCCTACAGTCATTGAAATTGATAAAATGCCAAATTTGCACCAAATAGAGAGAGCATTGATTCAACTTGGTTGTCACCCAAGTGTACCAGCAGTGTTCATAGGACAACAATTTATTGGTGGTGCTGATAAAGTCATTGGTCTCAATATTCAAAACAAGCTTTCCCAATTGCTTCTAAATGCTAAGGCTATATTTATTTGGGGTAGGTTGATAGCAGAAAATCCAGTAGTAATATTCAGCAAGAGTACATGTTGCATGAGTCATACAGTGAAGGCTTTGATATTCAGCTTTGGTGCTAACCCTACAGTCATTGAAATTGATAAAATGCCAAATTTGCACCAAATAGAGAGAGCATTGATTCAACTTGGTTGTCATCCAAGTGTACCAGCAGTGTTCATAGGACAACAATTTATTGGTGGTGCTGATAAAGTCATTGGTCTCAATATTCAAAACAAGCTTTCCCAATTGCTTCTAAATGCTAAGGCTATATTTATTTGGGGTAGGTAA 615 0.3724 MDAFARLIAENPVVIFSKSTCCMSHTVKALIFSFGANPTVIEIDKMPNLHQIERALIQLGCHPSVPAVFIGQQFIGGADKVIGLNIQNKLSQLLLNAKAIFIWGRLIAENPVVIFSKSTCCMSHTVKALIFSFGANPTVIEIDKMPNLHQIERALIQLGCHPSVPAVFIGQQFIGGADKVIGLNIQNKLSQLLLNAKAIFIWGR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0290 204 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lal5g0290 204 ProSiteProfiles Glutaredoxin domain profile. 100 200 - -
Lal5g0290 204 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 105 - -
Lal5g0290 204 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 106 204 - -
Lal5g0290 204 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Lal5g0290 204 TIGRFAM GlrX-like_plant: glutaredoxin-like family 105 200 IPR011905 -
Lal5g0290 204 CDD GRX_GRXh_1_2_like 12 93 - -
Lal5g0290 204 CDD GRX_GRXh_1_2_like 111 192 - -
Lal5g0290 204 Pfam Glutaredoxin 13 75 IPR002109 -
Lal5g0290 204 Pfam Glutaredoxin 112 174 IPR002109 -
Lal5g0290 204 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lal5g0290 204 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lal5g0290 204 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lal5g0290 204 SUPERFAMILY Thioredoxin-like 105 198 IPR036249 -
Lal5g0290 204 PANTHER GLUTAREDOXIN 106 204 IPR011905 -
Lal5g0290 204 PANTHER GLUTAREDOXIN 1 105 IPR011905 -
Lal5g0290 204 Gene3D Glutaredoxin 103 201 - -
Lal5g0290 204 Gene3D Glutaredoxin 2 102 - -
Lal5g0290 204 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0290 Lal-Chr5 2576797 2581927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0290 105 201 Miscellaneous Gene Families AT4G15690 49.485 6.29e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0290 K03676 - gmx:100803979 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0290 5 2576797 2581927 Lal5g0290 5 2576797 2581927 ECH
Lal3g1331 3 19111676 19111993 Lal5g0290 5 2576797 2581927 LSH
Lal24g0186 24 1335478 1338210 Lal5g0290 5 2576797 2581927 PCT