Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1331 ATGGAATTTTTGGCAAGGTTTACTTCTGATAAACCAGTAGTGATCTTCAGCAAAAGCACATGTTGCATGAGCCATACAGTGAAGGCTCTTATATTCAGTTTTGGTGCCAACCCTACAGTGATTGAAGTTGACAAAATGGCCAATGGGTACCTAATAGAAAGGGCACTTGTCCTACTTGGTTGTCACCCAAGTGTCCCAGCAGTGTTCATAGGACAACAATTTATTGGTGGTGCTGATAAAGTTATAGGCCTCAATATTCAAAACAAGCTTTCCCTATTGCTTCTTAATGCAAAAGCTATATTTATTTGGGGTAGGTAG 318 0.3994 MEFLARFTSDKPVVIFSKSTCCMSHTVKALIFSFGANPTVIEVDKMANGYLIERALVLLGCHPSVPAVFIGQQFIGGADKVIGLNIQNKLSLLLLNAKAIFIWGR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1331 105 CDD GRX_GRXh_1_2_like 12 90 - -
Lal3g1331 105 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Lal3g1331 105 Pfam Glutaredoxin 13 75 IPR002109 -
Lal3g1331 105 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 105 - -
Lal3g1331 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Lal3g1331 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lal3g1331 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lal3g1331 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lal3g1331 105 Gene3D Glutaredoxin 2 102 - -
Lal3g1331 105 PANTHER GLUTAREDOXIN 1 105 IPR011905 -
Lal3g1331 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1331 Lal-Chr3 19111676 19111993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1331 1 102 Miscellaneous Gene Families AT4G15690 50.000 2.88e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1331 K03676 - gmx:100803979 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1331 3 19111676 19111993 Lal3g1331 3 19111676 19111993 ECH
Lal3g1331 3 19111676 19111993 Lal5g0290 5 2576797 2581927 LSH
Lal24g0186 24 1335478 1338210 Lal3g1331 3 19111676 19111993 PCT