Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0291 ATGGACATAATCACAAGCATGGTGGCTGAAAAGCCTGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATAAAATCACTGATCATAAACTTTGGTGCAAACCCAACAATTTATGAGCTTGATGAAATCACAAATGGGAAGAATATTGAGAGTTTATTGATTCAAATGGGGTTCCAACCAAGTGTACCAGCTGTGTTTATAGGGCAACAACTTATCGGTGGCTCTAAGAGAATCATGAGTCTGCTTGTTAGGAATGAGTTAGTACCATTGCTGATTAATGCCAAAGCTATATGGATTTGA 309 0.3948 MDIITSMVAEKPVVIFSKSTCCLSHSIKSLIINFGANPTIYELDEITNGKNIESLLIQMGFQPSVPAVFIGQQLIGGSKRIMSLLVRNELVPLLINAKAIWI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0291 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lal5g0291 102 Gene3D Glutaredoxin 2 101 - -
Lal5g0291 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lal5g0291 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lal5g0291 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lal5g0291 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Lal5g0291 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Lal5g0291 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lal5g0291 102 Pfam Glutaredoxin 13 75 IPR002109 -
Lal5g0291 102 CDD GRX_GRXh_1_2_like 12 93 - -
Lal5g0291 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0291 Lal-Chr5 2588881 2589189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0291 1 102 Miscellaneous Gene Families AT4G15700 54.902 4.05e-40 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0291 K03676 - gmx:100816947 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0291 5 2588881 2589189 Lal24g0186 24 1335478 1338210 PCT
Lal24g0185 24 1332934 1333581 Lal5g0291 5 2588881 2589189 PCT