Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0473 ATGGATTCTGAGAGTGAAAGTTTTGACCTCTCAGGACCATTGCATCTGACTTATGTCTTATGGGATGATCCATATCATCGAATGTCAGTTACTGCTAGTTTGGTACAAGGTGTTTACATTCTAGAAAGGGACCGTCAAGAAAAACGAGAAGGTCCTGATGCTCTTGCACCACCTTGGTGGAAATTCTTCCACTTTCAGTTGCTTCGTCCACTTGTAGATGATGTTGATTCTTCCATCTTTGGAGCAGTCTATGAGTTCAAGCCTCCATCATCTCAGGACAATGACACTTTATACAGAAGTCCACGCTATGTCATTGCATTTCGAGGGACTCTAACTAAATCGGACTCAGTTTCACGTGATATCGCGTTGGATATCCACTTTATCCGACAAGGGCTTCATCAAACTTCTCGTGGTGACATAGCAATTCAAGCTGTTCGAAACATGGTAGCAACTGTAGGTGATTCAAATGTTTGGTTGGCAGGGCATTCCCTTGGATCAGCAATGGCGATGCTTACTGGGAAAACCATGGCCAAGTCAGGCATGTTCCTCAAATCCTTCCTTTTCAACCCGCCATTCGTGTCTGCCCCAATTGAGAGAATTAAAGATGAGAAAGTGAAACATGGAATTCGATTTATGGGCAGTGTGATAACCGCTGGACTCACCCTTGCTATGCAAGCTAAGCAGCCCAAGGACTTATCTGTCGATCCGTTTGCTGCTTTGGCTGCTTGGGTTCCATGTTTATTTGTGAATCCATCTGATCATATATGCTCAGAGTATATCGGATACTTCGAACACAGAAGAAAAATGGATGAGATTGGAGCAGGAGTCATTGAAAGGTTAGCAACTCAAAATTCTCTTGGCGGCCTTCTAATGAGTGCATTCGGGAAGGAATCTGAACCTCTGCACCTCATTCCTTCAGCTTCCGTAACAGTTAATGTTGGTCCTACGCATGATTTTAAAGATGCTCATGGGATTCATCAGTGGTGGAAACCTGACTTGCGCCTGGAACACAAGCTCTACAATTACAAATAG 1032 0.439 MDSESESFDLSGPLHLTYVLWDDPYHRMSVTASLVQGVYILERDRQEKREGPDALAPPWWKFFHFQLLRPLVDDVDSSIFGAVYEFKPPSSQDNDTLYRSPRYVIAFRGTLTKSDSVSRDIALDIHFIRQGLHQTSRGDIAIQAVRNMVATVGDSNVWLAGHSLGSAMAMLTGKTMAKSGMFLKSFLFNPPFVSAPIERIKDEKVKHGIRFMGSVITAGLTLAMQAKQPKDLSVDPFAALAAWVPCLFVNPSDHICSEYIGYFEHRRKMDEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASVTVNVGPTHDFKDAHGIHQWWKPDLRLEHKLYNYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0473 343 PANTHER LIPASE CLASS 3-LIKE 3 342 - -
Lal23g0473 343 Pfam Lipase (class 3) 142 182 IPR002921 GO:0006629
Lal23g0473 343 SUPERFAMILY alpha/beta-Hydrolases 20 196 IPR029058 -
Lal23g0473 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 342 - -
Lal23g0473 343 Gene3D alpha/beta hydrolase 72 198 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0473 Lal-Chr23 7447715 7450332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0473 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.895 3.11e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0473 - - gmx:100812620 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0473 23 7447715 7450332 Lal23g0473 23 7447715 7450332 ECH
Lal16g1149 16 7835206 7836990 Lal23g0473 23 7447715 7450332 LSH
Lal16g0072 16 433201 435897 Lal23g0473 23 7447715 7450332 PCT
Lal15g0055 15 387360 395341 Lal23g0473 23 7447715 7450332 PCT