Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1149 ATGGATTTTGAGAGGGAAACTTTTCACCTCTCAGGACCCTTGCATATGACTTATGTCCTATGGGATAATCCATATCATCGAATGTCAGTTGCTGCAAGTTTGGTACAAGGTGTTTACATTTTAGAAAGGGACCGGCAAGAGAAACGTGAAGGTCCTAATGTTCTTGCACCGCCGTGGTGGACATTCTTTCACTTTCGGTTGCTTCGTCCACTTATAGATGATGTTGATTCTTCCATCTTTGGGGCAATCTATGAGTTCAAGCCTCCATCATCTCAGAACAATGACACTTTAGATAGAAGTCCGCGTTATGTGATTGCATTTCGAGGGACTCTAACTAAATCCGACTCAGTTTCGCGTGATATCGCGTTGGATATCCACTTCATTCGACAAGGGCTTCATCAAACTTCTCGTGGTGACATAGCGATCGAAGCTGTTCGAAACATGGTCGCAACTGTAGGTGACTCAAATGTCTGGTTGGCAGGTCACTCCCTAGGATCAGCGATGGCAATGCTTACTGGGAAAACAATGGCCAAGTCTGGTATGTTCGTCGAATCATTCCTTTTCAACCCGCCATTCGTGTCTGCTCCAATTGAGAGAATTAAGGATGAGAAAGTGAAACACGGGATTCGATTCGCAGGCAGTGTGATAACTGCTGGACTAACCATTGCTATGCATGCTAAGCAACCGAAGGATTTATCGGTTGATCCGTTTGCAGCTCTGGCTGTCTGGATTCCATGCTTATTTGTGAATCCATGTGACCATATATGTTCGGAGTATATCGGATACTTTGAACACAGAAGAAAAATGGATGAGATTGGAGCCGGAGTAATTGAAAGGTTAGCAACTCAGAACTCACTAGGTGGACTTCTAATGAGTGCATTTGGGAAGGAATCTGAACCTCTGCATCTCATTCCTTCAGCTTCTCTAACAGTTAATATTGGTCCAACACATGATTTTAAAGATGCTCATGGCATTCATCAGTGGTGGAAACCCCACTTGCGCCTCGATCACAAGCTCTACAAATACAAATAG 1032 0.4399 MDFERETFHLSGPLHMTYVLWDNPYHRMSVAASLVQGVYILERDRQEKREGPNVLAPPWWTFFHFRLLRPLIDDVDSSIFGAIYEFKPPSSQNNDTLDRSPRYVIAFRGTLTKSDSVSRDIALDIHFIRQGLHQTSRGDIAIEAVRNMVATVGDSNVWLAGHSLGSAMAMLTGKTMAKSGMFVESFLFNPPFVSAPIERIKDEKVKHGIRFAGSVITAGLTIAMHAKQPKDLSVDPFAALAVWIPCLFVNPCDHICSEYIGYFEHRRKMDEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNIGPTHDFKDAHGIHQWWKPHLRLDHKLYKYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1149 343 Gene3D alpha/beta hydrolase 83 197 IPR029058 -
Lal16g1149 343 PANTHER LIPASE CLASS 3-LIKE 4 342 - -
Lal16g1149 343 SUPERFAMILY alpha/beta-Hydrolases 18 215 IPR029058 -
Lal16g1149 343 Pfam Lipase (class 3) 143 181 IPR002921 GO:0006629
Lal16g1149 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1149 Lal-Chr16 7835206 7836990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1149 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.692 4.56e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1149 - - gmx:100812620 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1149 16 7835206 7836990 Lal16g1149 16 7835206 7836990 ECH
Lal16g1149 16 7835206 7836990 Lal23g0473 23 7447715 7450332 LSH
Lal16g0072 16 433201 435897 Lal16g1149 16 7835206 7836990 PCT
Lal15g0055 15 387360 395341 Lal16g1149 16 7835206 7836990 PCT