Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0055 ATGGCTTCTGAGAGGGAAAGTTTTGACCTCTCAGGACCCCTTCATCTAACCTATATAGACTGGGATAATTTGTATCATCGAAAGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTACGTTCTAGAAAAGGATCGGCAAGAACGACGCCAAGGTGCCAATGCTCTCGCACCACCTTGGTGGGCGTTCTTCAACTTTCAGTTGCACAGTACAGTTGTTGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAGCCTCCATCATCTAAGTGCAATGACAATCTACATAGAATTCCAAGTTATGTGATTGCCTTTAGAGGGACTATAACCAAGGCAGACTCAGTTTCACGTGATATTGAGTTAGATATGCACTTTGTCAGAAATGGCCTTCATCAAACTTCTCGTGCCGAGATAGCTATCCAAGCTGTTAGAAACATGGTAGCTAGTGTTGGTGATACACATATCTGGTTGGCTGGTCACTCTTTAGGATCAGCGATGGCTATGCTTACTGGGAAAACAATGGCCAAGAGTAGCATTTTTATTGAATCTTTTCTTTTCAACCCTCCATATGTATCTGCTCCAATTGAGAGAATTAAGGATAAGAAAGTGAAACACGGTCTCAGAATTGCTAGTAGTGTCATAACAGCTGGACTCACCATTGCTATGAAGGCTAAGCAGCAGAAGAAGGGTTTGTCCTCCTCCTTTGATTCTTTGTCTGCATGGGTACCATGTTTGTTTGTGAATCCGTCTGACCCTATTTGCTCAGAGTATAAGGGATACTTTGAACACAGAAGAAAAATGGAGGAGATTGGCGCAGGAAGCATCGAAAGGCTAGCAACTCAAAACTCAATTGGTTGTTTAGTTATGAGTGCGTTTGGGAAGGAATCTGAACCATTGCACCTCATTCCTTCAGCTTCTCTCACAGTTAATTTGTCTCCTTCAAGGGATTTTAGAGAAGCTCATGGAATTCACCAATGGTGGAAACCTGACTTGTGCCTAGAATCCAAGCTCTACAAATATTAA 1029 0.4227 MASERESFDLSGPLHLTYIDWDNLYHRKSVAASLVQGVYVLEKDRQERRQGANALAPPWWAFFNFQLHSTVVDDVDSSIFGAIYEFKPPSSKCNDNLHRIPSYVIAFRGTITKADSVSRDIELDMHFVRNGLHQTSRAEIAIQAVRNMVASVGDTHIWLAGHSLGSAMAMLTGKTMAKSSIFIESFLFNPPYVSAPIERIKDKKVKHGLRIASSVITAGLTIAMKAKQQKKGLSSSFDSLSAWVPCLFVNPSDPICSEYKGYFEHRRKMEEIGAGSIERLATQNSIGCLVMSAFGKESEPLHLIPSASLTVNLSPSRDFREAHGIHQWWKPDLCLESKLYKY 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0055 342 Gene3D alpha/beta hydrolase 61 211 IPR029058 -
Lal15g0055 342 Pfam Lipase (class 3) 134 179 IPR002921 GO:0006629
Lal15g0055 342 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 342 - -
Lal15g0055 342 SUPERFAMILY alpha/beta-Hydrolases 36 199 IPR029058 -
Lal15g0055 342 PANTHER LIPASE CLASS 3-LIKE 2 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0055 Lal-Chr15 387360 395341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0055 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 55.245 1.24e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0055 - - lang:109332786 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0055 15 387360 395341 Lal15g0055 15 387360 395341 ECH
Lal16g0072 16 433201 435897 Lal15g0055 15 387360 395341 LSH
Lal15g0055 15 387360 395341 Lal16g1149 16 7835206 7836990 PCT
Lal15g0055 15 387360 395341 Lal23g0473 23 7447715 7450332 PCT