Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0072 ATGCCTTCTGAAAGGGAAATTTTTGACCTCTCAGGACCCTCACATCTTACTTATGTGGACTGGAATAATATGTATCATGGAAAGTCCGTTGCTGCTAGTTTGGTCCAAGGTGTTTATATTCTAGAAAAGGACCGACAAGGACAACGCTATGGTGTCAATGCTCTTGCGCCACCTTGGTGGTCGTTCTTCAACTTTCAGTTGCTCCATACACTTGTTGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAACCTCCACCTCCACCTCCACCATATAATTGCAGCTACAATTTACATCGAAGTCCACGTTTCGTGATTGCCTTCCGAGGGACTATAACCAATGGAGACTCAGTTTCACGTGATTTTAAGTTAGATATGCAATGTGTTATAAACGGGCTTCATCAAACTTCTCGTGCTCAGATAGCTATACAAGCTGTTAGGAATATGGTAACTAGTGTTGGTGGTTCAAATATTTGGTTGGCTGGTCACTCTTTAGGATCATCAATGGCTATGCTTGCTGGGAAAACAATGGCCAAGTGTGGCATTTATATTGAATCTTTTCTTTTCAACCCTCCATATATATCTGCTCCAGTTGAGAAAATTAAGGCTCAGAAAGTGAAACATGGTCTTAGAGTTGCTGGCAGTATGATAACAGCTGGACTCACCATTGCTGTGAAGGGTAAGCAGCAACAAATGAGTTTTCCCACCTTTGATCCCTTTTCTGCTTTGTCTGCATGGATACCATGCTTGTTTGTGAATCCATCTGACCCTATCTGCTCTGAGTATAAAGGATACTTTGAACACAGGCAAAAAATGGAGGAGATTGGTGCAGGAAGCATTGAAAGGTTAGCAACTCAAAACTCCATTGTTTGTCTAGTCATGGGTGCCTTTGGGAAGGACTCTGAACCTTTGCACCTCATTCCTTCAGCTTCTTTGACAGTTAATTTGTCTCCATCGAAGGAATTTAAACAAGCTCATGGGATTCACCAATGGTGGAAACCCCAAATGCACCTAGAATCCAATCTCTACAAATACTCTTAG 1050 0.4181 MPSEREIFDLSGPSHLTYVDWNNMYHGKSVAASLVQGVYILEKDRQGQRYGVNALAPPWWSFFNFQLLHTLVDDVDSSIFGAIYEFKPPPPPPPYNCSYNLHRSPRFVIAFRGTITNGDSVSRDFKLDMQCVINGLHQTSRAQIAIQAVRNMVTSVGGSNIWLAGHSLGSSMAMLAGKTMAKCGIYIESFLFNPPYISAPVEKIKAQKVKHGLRVAGSMITAGLTIAVKGKQQQMSFPTFDPFSALSAWIPCLFVNPSDPICSEYKGYFEHRQKMEEIGAGSIERLATQNSIVCLVMGAFGKDSEPLHLIPSASLTVNLSPSKEFKQAHGIHQWWKPQMHLESNLYKYS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0072 349 PANTHER LIPASE CLASS 3-LIKE 3 349 - -
Lal16g0072 349 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 349 - -
Lal16g0072 349 Pfam Mbeg1-like 106 179 IPR024499 -
Lal16g0072 349 Gene3D alpha/beta hydrolase 64 216 IPR029058 -
Lal16g0072 349 SUPERFAMILY alpha/beta-Hydrolases 53 198 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0072 Lal-Chr16 433201 435897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0072 1 282 Acyl Lipid Metabolism Gene Families AT2G05260 54.483 4.77e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0072 - - lang:109332786 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0072 16 433201 435897 Lal16g0072 16 433201 435897 ECH
Lal16g0072 16 433201 435897 Lal15g0055 15 387360 395341 LSH
Lal16g0072 16 433201 435897 Lal16g1149 16 7835206 7836990 PCT
Lal16g0072 16 433201 435897 Lal23g0473 23 7447715 7450332 PCT