Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0336 ATGCATTTCTGCTCCCAAAATTCATACATCACCAGTAAAGTCATAAACTTTATCTTCTTCTCTGCATTTTTTGCTCTCTTTGGAGGGGTTTTCAGTGAAGAACAGCACAGATTTCACCTTCACGGTGATGATTTTTACCATGGGGGATCACTATATCCTAACCCCAAGGAAGCGAATGTGTTCTTGTCTCTTGGCCATCAAGCTGGGTTTTACTACCCTCTTCCGAAGAGATCTCGTGTCAGTGTTCCATTTGATTTCAGTGGAGAGTGGTTTGTGCAGAAGCCAAAGACAACTATTGAATCTTTGCCAGATGAGTGTCTCTTCGAGATCCTGAGAAGGTTGCCAGTTGGCCAAGATAGGAGTCAATGCGCTTCAGTATCCAAGCGCTGGCTTATGCTTCTGAGCAATATTTCTAAGAATGAAATTTGCATGAATGAAAGTGCCAAAAATGAAAAGGAGGGTGGTGATGAGGGATATGGAGATGAAGGATACCTGTCACGAACCTTGGAAGGGAAGAAGGCAACCGATGTTAGACTCGCTGCCATTTCTGTTAATACTGCATGTAGAGGAGGATTGGGAAAGCTTTCAATTCGTGGAAACAACAAATCAGAATGTTGGGTGACCGATCTTGGTCTAAAGGCAATTGGTTGTGGATGCCCTTCTCTAAAGTCCTTTTCTCTATGGAATGTTGCTACCGTTGGTGATGCAGGCCTGATTGATATCGCTGCTGGCTGTCAACAATTAGAGAGGCTAGACCTCATCAACTGCCCAGCAATTTCTGACAAAGCTTTAGTTGCAGTTGCAATGAATTGCCCAAATCTGACCGAGTTATCAATTGAATCATGTCCTAACATTGGTAATGAAGGTCTGCAAGCTATTGGGAAGTTGTGTCCCAACCTTAGGTCTATATCAATCAATGATTGCTCCGGAGTTGGTGATCAGGGAATTGGTGGCCTTTTGTCTGCAACTTCTTCCGTTCTGACAATGGTGCATCTTGAGTCGTTGATGGTTTCCGATGTCTCTCTAGCAGTCATTGGGCATTATGGCATTTCAGTTACTGATCTTGTCCTTAATTGCCTCCCAAATGTCACAGAGAGGGGATTCTGGACTATGAGCAATGGTCGTGCACTGCAGAAACTAAAGTCACTCACAATTGGATCTAGCCGAGGAGTAACTGATGCTGGGCTTGAAGCTATTGGAAAGGGTTGTCCAAATGTTAGATACTTCCAGATTCGCAAGTGTCCATTTCTTTCAGACAATGGGTTGGTATCATTTGCCAAGGCTGCTCCATCAATTGAGAACCTGCAATTGGAAGAGTGTCACAGGGTTACCCAATTTGGGTTTTTTGGTCTCCTTTTTACCTGTGGTGCAAAATTGAAGGTTCTTACCCTGGCGAGCTGCTACGGGATCAAAGATATGAACTTGAGATTGCCTGAAGTGTTTCCTTGTGTATCACTCTGGTCATTGTCAATCTGTAACTGCCCTGGATTTGGTAATGCTACCCTTGCTGTATTGGGCAAGCTGTGTCCTCAGCTTCAGAATGTTGAATTGAATGGACTTGAGGAAATAACAGATACAGGGTTTCTTCCACTGCTTGAGAGCTCCAAGGCTGGTCTGGTTAAAGTTAATCTCCGTGGTTGCAAAAATGTTACCGACAAGGTAGTTTCATCCATCGCCAATTTGCATGGGTCGACTCTCGATGTGCTAAATCTTGATGGTTGCAATAAAGTCGGTGATGCTAGCTTGAAGGCAATTGCCTCCAACTGTCAAGTGCTCTCCGATCTTGATGTTTCAAGGTGTACAATCACTGACTCTGGGATTGCAGCCCTTACACGTGGGAACCTGCATAATCTGAAGATACTTTCTCTGGCATGTTGTGCATCGGTTTCAAACAAGAGTGTGCCTGCTTTGAAAAAATTGGGCCGTACCCTCGCTGGATTGAACATCCTTGCTTGCAATAGAGTCAGCAGCAGTGCAGTTCTCAAGCTTATGGAACAACTCCAGACCTGTGATATCCTCTCCTAA 2025 0.4435 MHFCSQNSYITSKVINFIFFSAFFALFGGVFSEEQHRFHLHGDDFYHGGSLYPNPKEANVFLSLGHQAGFYYPLPKRSRVSVPFDFSGEWFVQKPKTTIESLPDECLFEILRRLPVGQDRSQCASVSKRWLMLLSNISKNEICMNESAKNEKEGGDEGYGDEGYLSRTLEGKKATDVRLAAISVNTACRGGLGKLSIRGNNKSECWVTDLGLKAIGCGCPSLKSFSLWNVATVGDAGLIDIAAGCQQLERLDLINCPAISDKALVAVAMNCPNLTELSIESCPNIGNEGLQAIGKLCPNLRSISINDCSGVGDQGIGGLLSATSSVLTMVHLESLMVSDVSLAVIGHYGISVTDLVLNCLPNVTERGFWTMSNGRALQKLKSLTIGSSRGVTDAGLEAIGKGCPNVRYFQIRKCPFLSDNGLVSFAKAAPSIENLQLEECHRVTQFGFFGLLFTCGAKLKVLTLASCYGIKDMNLRLPEVFPCVSLWSLSICNCPGFGNATLAVLGKLCPQLQNVELNGLEEITDTGFLPLLESSKAGLVKVNLRGCKNVTDKVVSSIANLHGSTLDVLNLDGCNKVGDASLKAIASNCQVLSDLDVSRCTITDSGIAALTRGNLHNLKILSLACCASVSNKSVPALKKLGRTLAGLNILACNRVSSSAVLKLMEQLQTCDILS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0336 674 Gene3D Ribonuclease Inhibitor 272 478 IPR032675 -
Lal21g0336 674 SUPERFAMILY RNI-like 203 447 - -
Lal21g0336 674 Gene3D Ribonuclease Inhibitor 479 534 IPR032675 -
Lal21g0336 674 Pfam F-box-like 99 133 IPR001810 GO:0005515
Lal21g0336 674 Pfam Leucine Rich repeat 589 610 IPR001611 GO:0005515
Lal21g0336 674 Pfam Leucine Rich repeat 270 293 IPR001611 GO:0005515
Lal21g0336 674 SMART fbox_2 102 143 IPR001810 GO:0005515
Lal21g0336 674 Gene3D - 93 140 - -
Lal21g0336 674 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 47 664 - -
Lal21g0336 674 PANTHER UNCHARACTERIZED 47 664 - -
Lal21g0336 674 Gene3D Ribonuclease Inhibitor 535 670 IPR032675 -
Lal21g0336 674 Gene3D Ribonuclease Inhibitor 192 271 IPR032675 -
Lal21g0336 674 SUPERFAMILY RNI-like 356 670 - -
Lal21g0336 674 SMART LRR_CC_2 615 640 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 297 322 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 403 428 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 563 588 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 536 561 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 509 534 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 429 454 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 271 296 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 377 402 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 483 508 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 589 613 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 245 270 IPR006553 -
Lal21g0336 674 SMART LRR_CC_2 219 244 IPR006553 -
Lal21g0336 674 SUPERFAMILY F-box domain 95 135 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0336 Lal-Chr21 2242547 2245930 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0336 K14515 - gmx:100805418 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0336 21 2242547 2245930 Lal21g0336 21 2242547 2245930 ECH
Lal17g0231 17 1436531 1440003 Lal21g0336 21 2242547 2245930 LSH
Lal21g0336 21 2242547 2245930 Lal4g0218 4 1371950 1375330 LSH
Lal10g0023 10 240316 251158 Lal21g0336 21 2242547 2245930 PCT
Lal21g0336 21 2242547 2245930 Lal10g0023 10 240316 251158 PCT