Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1845 ATGGATTTCTCTCTTTCCAAGATACACCACTTTCACACAAACCTCTCACTCAATCTCCACCGTTCATCTCTCCCATCTTCATCATCCTCACCATTCTTTCGTTCTTTCAAACCACCACCACTCTCGACGTCGTCGTTTAAGCTTTCACTCATCAAATCTTCACTAAACGACCCTGCGTTTCACAATAACCCAAAACACACGTTCCCTGATCTCCTCCAAACCCTAATTTCCCCCGTCGTTGAAACCACCTGCATTGTCATCGCCGCCACCGCGTTCTTCTTCACGCGCCACATGCCTGTCACCGCCGCTAATATCCCGCCACTTTCCACCACCGTCGCGTCGGAACCGAACGCAGTGGTTGCTGCCGAAAGCGAGGGAGTCCTTGAGTCGCGTTTGAGCGAGAACCCTAACGACACCGAAGCGCTCCGCAATCTCATGGAGCTGAAAATACGAGCACGCAAAATCAACCAAGCGATTCAAGTTATTGAACGCTTAATTGAGATCGAGCCTGAAGAGTTGGAATGGCCTTTGCTCAAAGCTAATATGCATGTTTACAATGACGATCAAGAACTTGCACGCAACGTGTTTGAGGAAATTCTCAAGAGAGATCCACTTCGCGTTGAAGCGTATCATGGTCTTGTTATGGCGATTTCGGAATCGAACCAGCCATTGAATGGTGTGTTGAAGAGGGTTGAGGTGGCAGTGGAGAATTGCAAGAAGGAAAAGAAAGACTCTGTGGTGAGAGATTTTAAGCTGTTGATTGCGCAAATTAAAGTGATGGAGGGATATTTTTCGGAGGCGCTGAAGAATTATCAAGATTTGGTGAAAGAGGAGCCACGAGATTTTAGGCCTTATCTGTGTCAGGGTATTATATATACCCTGCTGAGGAAGAAAGATGAAGCCGAAAAACATTTCGAGAAGTTTCGGGGACTGGTTCCGAAGAATCATCCTTATAGAGAGTATTTTGAGGACAATATGTTTGCAACTAAGTTTTTCTCTCAGAAGTTTGAAAGGGAAGGAGCAGTGTGTAACACTTTTGTGGCATTGTTTTTGAATATATTGCAGCCTGATGCAACTGTAACCCCATTGCAGTCTGATAGGACTGTAGAGTGTGTATATGTATTCTGCTATGATGAGATAGACAAATACGTCTGCAAATATGAGATAATATTATCGATGAGTGGCCCAAACTTACCTTAA 1200 0.4483 MDFSLSKIHHFHTNLSLNLHRSSLPSSSSSPFFRSFKPPPLSTSSFKLSLIKSSLNDPAFHNNPKHTFPDLLQTLISPVVETTCIVIAATAFFFTRHMPVTAANIPPLSTTVASEPNAVVAAESEGVLESRLSENPNDTEALRNLMELKIRARKINQAIQVIERLIEIEPEELEWPLLKANMHVYNDDQELARNVFEEILKRDPLRVEAYHGLVMAISESNQPLNGVLKRVEVAVENCKKEKKDSVVRDFKLLIAQIKVMEGYFSEALKNYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKHFEKFRGLVPKNHPYREYFEDNMFATKFFSQKFEREGAVCNTFVALFLNILQPDATVTPLQSDRTVECVYVFCYDEIDKYVCKYEIILSMSGPNLP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1845 399 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 5 338 - -
Lal1g1845 399 SUPERFAMILY TPR-like 132 315 IPR011990 GO:0005515
Lal1g1845 399 Coils Coil 145 165 - -
Lal1g1845 399 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 5 338 - -
Lal1g1845 399 ProSiteProfiles TPR repeat profile. 139 172 IPR019734 GO:0005515
Lal1g1845 399 Gene3D Tetratricopeptide repeat domain 110 330 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1845 Lal-Chr1 20717866 20721488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1845 - - lang:109348412 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1845 1 20717866 20721488 Lal1g1845 1 20717866 20721488 ECH
Lal11g1127 11 15010809 15011909 Lal1g1845 1 20717866 20721488 LSH
Lal1g1845 1 20717866 20721488 Lal20g0067 20 445208 447039 LSH
Lal1g1845 1 20717866 20721488 Lal13g1106 13 8409137 8410153 PCT
Lal13g1106 13 8409137 8410153 Lal1g1845 1 20717866 20721488 PCT