Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1106 ATGGAGTCTCTCCTTCAAATTCCCCACTCTCAGCCACCATTCTTTCACTACTTTCTCAATCACCGCCGTTCATCTCTCTCATCTTCCATCTCCTTCCAATTTCCCTCATTTTCTTCTTCTACACCCTTTCACTTATCACCCATCAGAGCCTCTTCTTCACCTAAAAACCCTTATTTTCATAATCCCAAAAATACCCTCACCCACTTACTCCAAACCCTACTCCCCATTTCTTCATTTCTCATCGAACCCATTTGCGTCGCAACAGTCGCAGCTTCGCTATTCTTACTCCGCCGTCACTACAACCAAACCGTCACCGTCACTCCAGCCGCGCCGCCGCCGGAGACCACCACTGAACTTCTCTACGACGAGGAAAACGACGCTGACGAGAAATTAAACGATGACACTGAAGCTCTTAAGTCTCTTGTTCAGGATAGCATCAGCGAAGGTAAAATTGAGGAAGCGATTCGCGCTATAGACGGTTTAATCGAGCTCGAACCGGACGAGCTCGAGTGGCCAATGATTAAGGCTCAGATTTATGTATATAAAGAAGAACATGAATTGGCCTTTAATAGTTTTGAAGATGTGTTGCAAAAAGATCGGTTTCGAGTTGACGCGTTACACGGCCTAATGTTGGTAACTTTTGAATTGAATAAACCTATTGATGATTTGTTGAGTAGGATTGATGAGGCAGTGGAGTTTTATAAAATTGAAAAGAGGGATTCGGAGGTTAGGGATTTGAAGCTTTTGATGGCTCAGATTAAGGTGATAGAGGAGGATTTTGATGGCGCGGTGAGAGTGTATGAAGAGATTGAGAAGGAAGAACCTGAGGATTTTAGGCCTTACTTGTGTCGAGGTATTGTGTATACTATGCTGAGAAGGAAAGATGAAGCAGAGGAACAATTTGAGAAGTTTCGGAAGCTTGTCCCGGATGATCATCCTTATAAAGAGTATTTTGAGGATAACACGATGGAGTTCTCGCTGGACCTTGCAAGCGAAGGAATGGCTGCAAAGAGATGA 1017 0.4405 MESLLQIPHSQPPFFHYFLNHRRSSLSSSISFQFPSFSSSTPFHLSPIRASSSPKNPYFHNPKNTLTHLLQTLLPISSFLIEPICVATVAASLFLLRRHYNQTVTVTPAAPPPETTTELLYDEENDADEKLNDDTEALKSLVQDSISEGKIEEAIRAIDGLIELEPDELEWPMIKAQIYVYKEEHELAFNSFEDVLQKDRFRVDALHGLMLVTFELNKPIDDLLSRIDEAVEFYKIEKRDSEVRDLKLLMAQIKVIEEDFDGAVRVYEEIEKEEPEDFRPYLCRGIVYTMLRRKDEAEEQFEKFRKLVPDDHPYKEYFEDNTMEFSLDLASEGMAAKR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1106 338 ProSiteProfiles TPR repeat profile. 278 311 IPR019734 GO:0005515
Lal13g1106 338 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 15 324 - -
Lal13g1106 338 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 15 324 - -
Lal13g1106 338 Gene3D Tetratricopeptide repeat domain 93 320 IPR011990 GO:0005515
Lal13g1106 338 SUPERFAMILY TPR-like 134 312 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1106 Lal-Chr13 8409137 8410153 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1106 - - lang:109338090 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1106 13 8409137 8410153 Lal13g1106 13 8409137 8410153 ECH
Lal11g1127 11 15010809 15011909 Lal13g1106 13 8409137 8410153 PCT
Lal1g1845 1 20717866 20721488 Lal13g1106 13 8409137 8410153 PCT
Lal20g0067 20 445208 447039 Lal13g1106 13 8409137 8410153 PCT
Lal13g1106 13 8409137 8410153 Lal11g1127 11 15010809 15011909 PCT
Lal13g1106 13 8409137 8410153 Lal1g1845 1 20717866 20721488 PCT
Lal13g1106 13 8409137 8410153 Lal20g0067 20 445208 447039 PCT