Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0328 ATGAAAACACACAAAGAGAAACACCTTCTTCTCCCAAAAGTGGTAGACATTACATGCATGGACTCAACTCATCCACCGGTGGTGGCTGAGAAAGTATGCAAAACGGTGCGTTTATTAGGGTTCCTCATTCAAAACGGTGTATCCAAAAGCAAGGTCATAAACGACATGCATGACGTCATGCAGAGAGGTAAGAACATTGGTAAGGCACTCAACAACGTTGTGGCGCGTCACCACGAAGCCATCACGTGCCGCTCACGTGACACACACATGTCATTCGTGTCCCCATTGGAGTACCAGTTCAGCTGCAGTGGCAGTCCGCCACGTCCCTCACGCGTTCTCTCCAAGCGGAGACTGTCTCCGGCCACCGCTGTGCATCCCGGACATGGCCGTGACTCGCCGGGACACTGTCGTGGGGTGGTGAGAATGTGTGGTGGAAATAGCAATGACACGTTGGTGGAGCATTATAGACCAGTGAGGAGGCACGTGAAGATCACGGGGTCTGGTGCGTCTTTATTACGTGATACGGAGAAGGAGTTGCACGTGGATGAGGAAGCAGAGAAGTTCATAGACAAGTTTTACAGAGAGTTGAGGTTGCAAAAATGGTTAGATCATCACTATTACTGA 624 0.5032 MKTHKEKHLLLPKVVDITCMDSTHPPVVAEKVCKTVRLLGFLIQNGVSKSKVINDMHDVMQRGKNIGKALNNVVARHHEAITCRSRDTHMSFVSPLEYQFSCSGSPPRPSRVLSKRRLSPATAVHPGHGRDSPGHCRGVVRMCGGNSNDTLVEHYRPVRRHVKITGSGASLLRDTEKELHVDEEAEKFIDKFYRELRLQKWLDHHYY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0328 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 20 205 - -
Lal17g0328 207 Pfam Cotton fibre expressed protein 180 200 IPR008480 -
Lal17g0328 207 PANTHER DUF761 DOMAIN PROTEIN 20 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0328 Lal-Chr17 2080163 2080786 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0328 - - lang:109327860 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0328 17 2080163 2080786 Lal17g0328 17 2080163 2080786 ECH
Lal16g1075 16 7198689 7199309 Lal17g0328 17 2080163 2080786 ECH
Lal8g0260 8 1733103 1733922 Lal17g0328 17 2080163 2080786 ECH
Lal10g1119 10 18017627 18018130 Lal17g0328 17 2080163 2080786 ECH