Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0260 ATGGAAAACAATCTACCAATAATAGCGAAGAGAGTATGGAGCATGGTCCATGTCGTAATATATATGTTGAGAAAAGGCTTCTCCAAAGGTAAACTAATGATGGACCTCAACATGGTCCTTAAACGCCGTGGAAAGCTCGCCGGAAAAGCCATCGCTAACCTAATGTTCCACCATCACCACAACGGTGGCTCCACCTCTAGCCGCCGTGACTCCAACCTCCAATTCAACGCCCAAAGGGAGTATGAGTTCAGCTGTAGCAACACACCTAACCACTTCTTCCCTATCGGCGGCAAGCGCAATCGCAACCACAACCACAACCACAATCAATCATCCAGGTGCGCTCACGTGCCACCCTCCGAAGAGGAAGACATGAATGCAGTGAAAGCTGTGCTTGAAATGCTAAACATGAATAACAGTGAGACCGGCATGGTTGAGTCATTATATTCATCACCGGCACTTTCTGGGTTCGGAAAGAGTCCAATGGTGAGGCAGCTTAGAGTGACGGACTCACCATTCCCACTGGCCGGAGATGATAAGGACAACATGGTGGACAAGAAAGCTGATGAGTTCATTAAGAGGTTTTACAAACAATTGAGGAACCAAGATTAA 609 0.4729 MENNLPIIAKRVWSMVHVVIYMLRKGFSKGKLMMDLNMVLKRRGKLAGKAIANLMFHHHHNGGSTSSRRDSNLQFNAQREYEFSCSNTPNHFFPIGGKRNRNHNHNHNQSSRCAHVPPSEEEDMNAVKAVLEMLNMNNSETGMVESLYSSPALSGFGKSPMVRQLRVTDSPFPLAGDDKDNMVDKKADEFIKRFYKQLRNQD 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0260 202 MobiDBLite consensus disorder prediction 99 119 - -
Lal8g0260 202 Pfam Cotton fibre expressed protein 180 201 IPR008480 -
Lal8g0260 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 201 - -
Lal8g0260 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0260 Lal-Chr8 1733103 1733922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0260 - - gmx:100786928 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1075 16 7198689 7199309 Lal8g0260 8 1733103 1733922 ECH
Lal8g0260 8 1733103 1733922 Lal8g0260 8 1733103 1733922 ECH
Lal8g0260 8 1733103 1733922 Lal17g0328 17 2080163 2080786 ECH