Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1502 ATGGGGTCCACTTCAGGGGAGTCAATGCAAGGTTCAGAAGGCCGTGAAGAGAGAATTGTTGTTTCGGTTCGTGTTCGGCCTCTTAACGATAAGGAGCTTGCAAAAAATGATGTTTCAGAATGGGAATGTAGTAATGACACTACCATCATATACAGGAGCAATGTTCCAGCTTCTGATAGGTCCCTCTATCCAACAGCTTATTCATTTGACCGAGTGTTTAGGACTGATTGCCCAACACATAAGGTGTATGAAGAAGCAGCTAAGGAAGTTGCGCTTTCGGTTCTTAGTGGCATCAACTCAAGCATTTTTGCATATGGACAAACAAGCAGTGGAAAGACATACACCATGAGTGGTATAACTGAGTATGCTGTAACAGACATTTTTAACCACATAGAAAATCATAAGGAAAGGGAATATGTTTTGAAGTTTTCAGCATTGGAGATCTATAATGAATCTAGAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTGTGCTTGACTTGAATCATTTTGAAGAACTTATTTCTTTCTGTGAAACTCAAAGGCAGATAGGGGAGACATCACTGAATGAAGCAAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGCTCGGCATGTGAATCAATGGTAAATGGCAAATCGAGCTCTCTTGCTGCCTCAGTGAATTTTGTTGATCTTGCTGGGAGTGAGCGTGCATCCCAAACTAATTCAGCTGGCACGAGGTTGAAAGAGGGTTGCCACATTAATCGTAGTCTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAAGGAACATATTCCTTTCAGAGATTCAAAGCTAACTCGCATATTGCAATCCTCATTAGGAGGGAATGCTAGGACTGCAATCATCTGCACAATGAGCCCCGCTCGGAGCCATGTTGAACAAAGCAGAAATACCCTCTTATTTGCAAGTTGTGCAAAAGAAGTGGCAACTAATGCACAAGTCAATGAAGTGATGTCTGATAAGGCCCTGGTCAAACAATTGCAAAGAGAGTTGACTAGACTGGAGAGCGAGTTGAGAAATTCAGGGTCAACCCAAATTAAATCTGATCCTGCAGCATTGTTGAGAGAAAAAGACCTCCAAATTCAGAAGAGGGTTGAGTTAAAATATTGGGATTTACCTAGGTTGGTTTTCCCAAGTCCTGATACTTCTGAGTATTCTGACCTCACTTTCTGTGTTTTAATCAAAGAGGTAACGGATCTGACTTTACAGCGGGACCTTGCTCAATCTCAAATGACAGACATGTTCCATGTGGTTGGAGATGATATGCCCTCAACTGAAATGGATAGTATGGATCCTCAATATCCGAAATTGCGTGTGCGAAGTTCATGGGACTTTGAAAATCTAACCGAGGAACCAAATTTATCATATTTTGACTTGGAGAGTGTCAAATCTTTTGATGCATCACAATATTCAGATGGACACAGTATTAGCTCTGATGATAACTATTTTCAACTTCCTGACTTGGAGAAGAACCTCCCCATTAGACTTTCTCCTCCAGGTCTACCTATTGCTGGTCTTGCTGCTGCAAGGAATGATTTAGGCCAGAAGAACATAGAAGAACATCATGATGGGAATTTTGGGATTCGTTGCGTCGAGTCAGAAGACCTAATTACAAACACCTATACACCCTTAAACACATCAGACTTAAGTCTAAATTTATACACAGATTCTAATGTATCATCTCCGGGTGCAAATAATGTTGTCTCAGGATTGACTGAAATTGATAAAGAGAACAAAGAAAATATAGATTTGTGTTCAGCCATGTTAAAGGAAAACAAAGTATCAAACCAGTTCAACCAAAATTTTATTCTTCCCTCTCCAGGGAAAATATCTGCATGGCTTGCAGAATATGGTGCATCTAGTTCTAGAAGCTTGAAGTTGACCAGGAGCAGAAGTTGTAAAGCAACTCTCTTGAGGGATTCATCTCCAGATTGGTTTGAACAGGAAGACATAATTCAGTGCACACCCTTCAACGGAGGACCCGGGGGCTTTCAAAGGAAGTCATGTACACTAAACTATAATGACAAAGATGCCAGGCTATCATGGACTGGTCATGGTAATTTTGTTGGAAGTGCTGCAATTGATGTACAGAATGTTATACCCTCTGCTGACGAGGTAAGTGATGGCAACGATGTTTTAGCTCTAGAAAGAAAGGAAAATAAAGATCCTGGGAATGCAAATCTACCGGCGAACCATGTGGTTCCAGAGACAGGATCTGAGCCCATAATTCCTGCAAAGAAGTTCAAAGATGTTGGATTGGATCCTATGCAATCAGATGAAGAAAAACATTACTGGCCTTCAGAATTTAAGAGGCTGCAAAGGGAGATTATTGAACTCTGGCATGCTTGTAATATTTCATTGGTTCACAGGACTTATTTTTTCCTTCTATTCAAGGGGGACCCATCAGATTCTATCTACATGGAGGTAGAACTGAGAAGATTGTCTTATCTCAAGCAAACCTTTGTAAATCAGACTATGAAAGATGGACAAATCCATACCTCTCAATCTAACACGAGGTATCTTCGAAGAGAAAGGCAGATGTTGAGCAGGAGAATGCAGAGGAAGCTGTCAAGATCTGAGAGAGAGAAGCTCTATTTTAAGTGGGGTATCCGCATAAGCTCAAAAAATAGGAGTTTACAATTGGCTCATCGGCTATGGGCTGACACAGAAAACATAGACAAGATTAGAGAAAGTGCAGCCATTGTTTCAAAGCTGGTTGGTTCAGTAGAACCAGATCATGCTTTTAAGGAGATGTTTGGCCTCAACTTTGCTCCACAGAACAGAAGGAAGAAATCTTTTGGGTGGGCAGCCACTATAAAACATATTTTGTGA 2877 0.4105 MGSTSGESMQGSEGREERIVVSVRVRPLNDKELAKNDVSEWECSNDTTIIYRSNVPASDRSLYPTAYSFDRVFRTDCPTHKVYEEAAKEVALSVLSGINSSIFAYGQTSSGKTYTMSGITEYAVTDIFNHIENHKEREYVLKFSALEIYNESRGTVVEKLTEETVLDLNHFEELISFCETQRQIGETSLNEASSRSHQILRLTIESSACESMVNGKSSSLAASVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRKEHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNEVMSDKALVKQLQRELTRLESELRNSGSTQIKSDPAALLREKDLQIQKRVELKYWDLPRLVFPSPDTSEYSDLTFCVLIKEVTDLTLQRDLAQSQMTDMFHVVGDDMPSTEMDSMDPQYPKLRVRSSWDFENLTEEPNLSYFDLESVKSFDASQYSDGHSISSDDNYFQLPDLEKNLPIRLSPPGLPIAGLAAARNDLGQKNIEEHHDGNFGIRCVESEDLITNTYTPLNTSDLSLNLYTDSNVSSPGANNVVSGLTEIDKENKENIDLCSAMLKENKVSNQFNQNFILPSPGKISAWLAEYGASSSRSLKLTRSRSCKATLLRDSSPDWFEQEDIIQCTPFNGGPGGFQRKSCTLNYNDKDARLSWTGHGNFVGSAAIDVQNVIPSADEVSDGNDVLALERKENKDPGNANLPANHVVPETGSEPIIPAKKFKDVGLDPMQSDEEKHYWPSEFKRLQREIIELWHACNISLVHRTYFFLLFKGDPSDSIYMEVELRRLSYLKQTFVNQTMKDGQIHTSQSNTRYLRRERQMLSRRMQRKLSRSEREKLYFKWGIRISSKNRSLQLAHRLWADTENIDKIRESAAIVSKLVGSVEPDHAFKEMFGLNFAPQNRRKKSFGWAATIKHIL 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1502 958 ProSiteProfiles Kinesin motor domain profile. 18 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 Gene3D Kinesin motor domain 153 365 IPR036961 -
Lal15g1502 958 CDD KISc_CENP_E 19 323 - -
Lal15g1502 958 Pfam Domain of unknown function (DUF3490) 783 941 IPR021881 -
Lal15g1502 958 ProSitePatterns Kinesin motor domain signature. 222 233 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal15g1502 958 PANTHER CENTROMERE PROTEIN E 386 958 - -
Lal15g1502 958 PANTHER CENTROMERE PROTEIN E 5 378 - -
Lal15g1502 958 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 PRINTS Kinesin heavy chain signature 187 204 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 PRINTS Kinesin heavy chain signature 223 241 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 PRINTS Kinesin heavy chain signature 273 294 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 SMART kinesin_4 16 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 Pfam Kinesin motor domain 153 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 Pfam Kinesin motor domain 24 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1502 958 Coils Coil 332 359 - -
Lal15g1502 958 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 386 958 - -
Lal15g1502 958 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 5 378 - -
Lal15g1502 958 Gene3D Kinesin motor domain 14 152 IPR036961 -
Lal15g1502 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1502 Lal-Chr15 17142511 17148558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1502 19 353 Miscellaneous Gene Families AT4G39050 43.454 5.19e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1502 K11498 - gmx:100775190 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0081 4 483504 499278 Lal15g1502 15 17142511 17148558 ECH
Lal15g1502 15 17142511 17148558 Lal15g1502 15 17142511 17148558 ECH
Lal2g0117 2 703532 712095 Lal15g1502 15 17142511 17148558 ECH
Lal9g0135 9 871386 878890 Lal15g1502 15 17142511 17148558 ECH
Lal16g0145 16 870349 885569 Lal15g1502 15 17142511 17148558 LSH
Lal15g1502 15 17142511 17148558 Lal23g1456 23 14921298 14927104 LSH
Lal16g0145 16 870349 885569 Lal15g1502 15 17142511 17148558 PCT
Lal15g1502 15 17142511 17148558 Lal15g1502 15 17142511 17148558 PCT
Lal23g1456 23 14921298 14927104 Lal15g1502 15 17142511 17148558 PCT
Lal15g1502 15 17142511 17148558 Lal16g0145 16 870349 885569 PCT
Lal15g1502 15 17142511 17148558 Lal23g1456 23 14921298 14927104 PCT