Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0135 ATGGGTGCTATTGGTGGAGAAGAAGTAGCCAAATGGGAGAAGATGCAAGGAGTGAGTGGTCGTGAAGAGAAGATTCTTGTGTTAATAAGGCTTAGACCATTAAGTGAGAAGGAAAATGCTTCTAATGAATCAGCAGATTGGGAATGCATTAATGATACTACCATTTTGTACCGGAACACATTGCGGGAGGGTTCCACATTTCCAAGTGCTTACACATTTGACAGAGTATTTCGAGGTGATTGTGCCACAAGGCAGGTATATGAGGAAGGAGCCAGAGAAATTGCACTTTCAGTTGTTAACGGAATTAACTCAACTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATATACAATGATTGGAATAACCAAATATGCTGTAGAAGATATTTTTGAGTATATAAATAGGCATGAAGAAAGAGCATTTGTGTTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACTGACAACTCTCCTCTCAGGCTGCGTGACGATCCAGAGAGAGGACCCATCTTAGAGAAACTTACAGAGGAGACCCTACAGGATTGGGGACATTTGGAAGGGCTTTTAGCTTTCTGTGAAGCACAAAGACAGGTAGGAGAGACAAACCTGAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAGTAGAAAGTTCTGCCAGGGAATTCTTGGGCAAAGGAAACTCAGCTACCTTATCAGCTAGTGTGAATTTTGTTGATTTGGCTGGGAGTGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGACTGAAAGAAGGTTGTCATATAAATCGGAGTTTACTTACACTTTCAACGGTCATTCGTAAGCTTAGTAAGGGAAGACAGGGTCACATCAATTACAGAGATTCTAAGTTGACACGCATACTACAGCCTTGCTTAGGTGGGAATGCTAGAACAGCAATTATTTGCACTTTGAGCCCGGCTCGAAGCCATGTTGAGCAAACTAGAAACACACTTCTTTTTGCATGTTGTGCAAAAGAAGTGACCACCAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAGTTGCAAAAGGAGGTTGCCAGATTGGAAAGTGAGTTGAGGGCACCTTCTCCTCCTACCTCCAATGGTGATTATGCTGCAGCGTTGTTGAGAAAGAAAGATCTCCAAATAGAAAAGATGGAGAAGGATATTAGGGAGCTAATTAAGCAACGTAATCTTGCTCAATCAAGGATTGAGGAATTGCTACATATGGTTGAAAAGGATCAAATGTCTATAAAAGAAGGGGATATCAGAGAAGATGGTGATTTACTGTTAGAGTCGTCAAGCATTTGTGGTCCTCATCGTCCTGATGAATACCCTGATCACTGCAAGGAAGTTATTATACATTTGTTAGCTTTTGCTTGCACAGAATACCCTGATCACTGCAAGGAAGTTCGATGTGTTGTGTTGGAGGAGTCAAGTAGAGGGAACTTAGAATATATTGATCAATCGGCAAGTGACAACAGAGAGTTGGCATTACCCATTTCTGGAGAGGTAAATGGATCAAGTCAGGAAATATCTACCAGTTCAAATGAGGATAGGGGAGAGAGTCAGGACCAAGTCAACTCAACATATGGTGTGTTGGAGCAGAGACTTCATGATGTACAAACGACCGTTGGTTCTCTTGTACATCCTTACCCTGATGAACAATCTCCACAGGCCATGTCAGGAAATATGTCTAACTTTAGGAATTCTAAATTAACTAGGAGCTGGAGCTGTGCGGAATATCACATGGCTGACTCTCTGGAGAGGACTCCAGCTAATGAATTTGAAAAAGGATTCCTTGGAAGACCAGATGGTTTGCGGAGAAAGTTACCCTCATTAAGTTATGGTAGTTCCACAAGATTGTCAAGGAATGTTTCTCCATCCTCTACTGGAAGTCCTTCAGCAGATGACTTTAGCGCAAACAGTATGAGAACATCTGCTAATGAGAATATTACTAGCATCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTCGAGTACAAGAAGCAGCTGGTTGATGGTCAGGATCAAGAGACAGGTGGAAAACAATATAATTTTGAGAAGTATGTGAAAGATGTAGGTGTGGATCCAATGTTGGTGGCACCTGGAACTCCATTAGATTGGCCTCTGCAGTTCAAGAGATTGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCAATGACCCACAGGACCTACTTCTTTCTTTTGTTCTCGGGTGATCCAGCAGACTCCATTTACCTGGAGGTAGAGCATAGAAGACTTTCTTTCCTCAAAGAAACATTTTCTGACGGAAACCTGTCTGAGAAGGATGGTCTAATCACGCTAGCTTCAAGTGCGAAGGTTCTTAGACGAGAGAGAGAACTGCTTGTCAAACTTATGCAGAAGAGGCTTTCCGAGGGAGAGAGAAATGGTCTATTCAAGGAGTGGGGCATTGTTTTGAATTCAAAGCGGAGGAAGATGCAACTGGCGAATCGTTTATGGAGCAACAATGATATGAAACACGTAATGGATAGTGCAGAAGTAGTTGCAAAGTTGGTAAGGTTTTCAGAGCAGGGTAAGGCCCTGAAGGAGATGTTCGGGCTTAGCTTCACACCCAGACTCACACGAAGGAGTTCCTTTTCATGGAAAAATAGCAGCAGATTATCTCTTTTATAG 2724 0.4214 MGAIGGEEVAKWEKMQGVSGREEKILVLIRLRPLSEKENASNESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCATRQVYEEGAREIALSVVNGINSTIFAYGQTSSGKTYTMIGITKYAVEDIFEYINRHEERAFVLKFSAIEIYNEIVRDLLSTDNSPLRLRDDPERGPILEKLTEETLQDWGHLEGLLAFCEAQRQVGETNLNEKSSRSHQIIRLTVESSAREFLGKGNSATLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRQGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKEVARLESELRAPSPPTSNGDYAAALLRKKDLQIEKMEKDIRELIKQRNLAQSRIEELLHMVEKDQMSIKEGDIREDGDLLLESSSICGPHRPDEYPDHCKEVIIHLLAFACTEYPDHCKEVRCVVLEESSRGNLEYIDQSASDNRELALPISGEVNGSSQEISTSSNEDRGESQDQVNSTYGVLEQRLHDVQTTVGSLVHPYPDEQSPQAMSGNMSNFRNSKLTRSWSCAEYHMADSLERTPANEFEKGFLGRPDGLRRKLPSLSYGSSTRLSRNVSPSSTGSPSADDFSANSMRTSANENITSIQTFVAGMKEMVKLEYKKQLVDGQDQETGGKQYNFEKYVKDVGVDPMLVAPGTPLDWPLQFKRLQKEIIELWQSCYVPMTHRTYFFLLFSGDPADSIYLEVEHRRLSFLKETFSDGNLSEKDGLITLASSAKVLRRERELLVKLMQKRLSEGERNGLFKEWGIVLNSKRRKMQLANRLWSNNDMKHVMDSAEVVAKLVRFSEQGKALKEMFGLSFTPRLTRRSSFSWKNSSRLSLL 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0135 907 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 378 IPR027417 -
Lal9g0135 907 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 902 - -
Lal9g0135 907 Coils Coil 393 427 - -
Lal9g0135 907 Coils Coil 355 375 - -
Lal9g0135 907 MobiDBLite consensus disorder prediction 518 544 - -
Lal9g0135 907 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal9g0135 907 Gene3D Kinesin motor domain 16 377 IPR036961 -
Lal9g0135 907 CDD KISc_CENP_E 24 346 - -
Lal9g0135 907 PANTHER CENTROMERE PROTEIN E 6 902 - -
Lal9g0135 907 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0135 907 MobiDBLite consensus disorder prediction 616 659 - -
Lal9g0135 907 Pfam Domain of unknown function (DUF3490) 731 889 IPR021881 -
Lal9g0135 907 MobiDBLite consensus disorder prediction 630 659 - -
Lal9g0135 907 MobiDBLite consensus disorder prediction 520 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0135 Lal-Chr9 871386 878890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0135 22 376 Miscellaneous Gene Families AT5G06670 42.382 5.65e-79 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0135 K11498 - gmx:100820012 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0135 9 871386 878890 Lal9g0135 9 871386 878890 ECH
Lal9g0135 9 871386 878890 Lal15g1502 15 17142511 17148558 ECH
Lal9g0135 9 871386 878890 Lal23g1456 23 14921298 14927104 ECH
Lal2g0117 2 703532 712095 Lal9g0135 9 871386 878890 LSH