Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0081 ATGAGAGAGAAAGGATTCAGAGAAGAGCACGAGAACGTGTCTCTTTCAAATACAACAGATGAAGAGAGAATCGTTGTTTCTATCAGAGTAAGACCTTTGAACGAGAAAGAAAAAGCGAGACACGATGTTTCTGAATTGGAATGCGTTTCTAACAACACTATCAGGTTCAAGAATAACACCGTCGTTGAACAACGTTCATTGTCAAATGATGCCTACACATTTGACAAGGTATTTGGGGAAAGGTGCTCCACACATCAGGTATATGAGCAAGGGATTAAGGAAGTTGCTCTTTCAGTAGTTAGTGGTATCAACTGTAGCATTTTCGCATATGGACAGACAAGCAGTGGAAAGACATACACCATGACTGGAATTACTGAATATGCTGTAAGGGATATATATGACTACATAGGGAAGCATAAAGAAAGAGAATTTGCTGTGAAATTCTCTGCCATGGAGATTTACAATGAAGCTGTCAGAGACCTTCTCAGTGCAAATGCTACACCACTAAGAGTCCTAGATGATCCAGAGAAAGGAACTGTTGTTGAGAAACTCACAGAGGAGACTTTGAAAGATAAGAACCAGTTGCAGGAACTACTTTTTATATGTGCAGCTGAAAGGACAACGGAAGAGACAGCCATGAATGAAACTAGCTCCAGATCTCATCAAATTCTTAGATTGACAGTTGAAAGTAATCCCAATGATTATGCACGCACTGCACGTTCTGGCACTTTGATAGCCAGTGTGAATTTTGTTGATCTAGCAGGAAGTGAGCGTGCTTCTCAGGCATTATCAGCAGGCACTAGATTGAGAGAAGGTAGCCACATAAATCGCAGTTTATTGACCCTTGGAACTGTAATTCGGAAACTAAGCAAGGAAAGAAATGGACACATACCTTATAGAGACTCTAAGCTTACTCGCATTCTACATAACTCCTTAGGAGGCAATGCCAGAACAGCCATCATTTGTACCATCAGTCCTGCACGCAGTCAAGTTGAGCAATCAAGAAATACCCTATTTTTTGCTGGGTGCGCAAAACAGGTGGCCACTAATGCCAAGGTCAATGTAATGATATCAGACAAGGTTTTGGTAAAGCAACTGAAAAATGAGTTGGCTAGAATGGAGAATGAGTTGAGGAACAGCACCCCAAATACTGCCATACTTAGGGAGAGAGAACTGCAGATTGAACAGATGGGTAAACAAATCAAAGAATTGACTCGGCAACGTAATCTCTTTCAATCTCATGTTGAAAATTTGCTCCAGACAGCCGGAAAAGATTGGCCTATGAGAGTAGATAAAGATTCAGGCTCGGAATTATCATGTGTTTCTAATAGTATTAGTCCTGGAACAGAACACACATTTGAGAATTTGGACAAAACAACAACCACTTCTATTTCGAATGAGCAGCTTTCACAGCAAAATGAGAGTTTTGAAGGCGACTTTCTTTTGGATGGAAGTCCTCCCGCGTTTGTTGGGCCTGACCCATGTCAAGGTTGGGAAGAGATAGCTAGCAGAGCTGAATCAGAAGATAACTTCAAGGAAGTTCCATGTATTGAGATAAAAGAAATGGAAACAGACCACATAGCAGATGTTGATACATCCATTCCCGATTTTGAACAAGGAGGAAATACACCCATGATACATGTAGTGAATGCAGATGCTATTACTAAATCACCCTCGAGGTATGGATATAGTGGGTTGAGTCATGTTGCCTTATATCATAGTACAGATGCTCTGCAGGAAAAAACTCAGGACCTTCATGTGGACCTCTTGGAGAAATTCAACGTGTCTTCTGAACCGGAACCACATATTTTTGCTGCAATGTCACCTCCTCAAACAGATAAGTCGGATCAGGAAACTTCATCACATCCTCAGTTCACTGAGTTAAATAATAATCAAGATGCTCTGCAGCAAAAAAATCAGGACTTTCATCTGGAACTCAGTGTAAAATCCAATGGGTCTTCTGAACCAGAACCACGTATTTCTCGTTCAAGGAATTCACGGAACAGAAGTAGTCAGCCCGTTTTAGCTGGTATGTCTCCTTCTCAAACAGATGAGGTGGATCAAGAAACTTCATCACATCCTCATTTCACTAAGTTGGACCAGAAAGTTGTGTCACCTCCTCAGTTTAATAAGCTGGATCAGGAACCCACTTCACATCCTCATTTTCATGAGCAGGAGCCTAAAACTATTTTACCTCCTCAATCTGTTAAGGCATCTCATTTTGATGAGCAAGAGGTTAACTCTATGTTTCCTCCTCAATCTGATGAATCACCTCATCTTCATGACCATGAGCTTAAAACTGTATTACGTCCTCAATCTGACGAGTCACCTCATTTTGATGAGCAAGAGGTTAAAACTATGTTACCTCCTCAGTCTGAGGTGTCACCTCATTTTGATAAGCAAGAGCTTAAAACCATGTTAGCTTCTCAATCTGGTGAGTTGGAGCAAGTATCAGACAAGGGATATTCTAATAGTTTGGTTGGCTTTTATGGCGAGCTATCTGAATCCGAGTTACATGTTATAAAAAGAAAATCTCCCCAAACATATTCCCTAGTTGAGGAGATGGATGCTTCAGTTGAAGAAGAATCTGTCGTGGATTCTGATACCGAAGAAACTGCCAGTGTCATCAATTATGTTACAAAAATGAATGGAAGGGCTAAGTCAGCATCATTGAAGAATGAGTTTGATGATCTTATGGTACGTGCAAGGACACATGAGGTCAATAAACATGTGAACAGAGTGAAAGGTATCAGTTTCCATGGAAATTGGGGATCTTCAATGCCTTCTGAGCTTGAGAGGAGACAGAGAGAGATAATCGAACTTTGGGATGCATGTAATGTACCATTGGCTCATAGGTCTTATTATTTCCTTCTCATCAAAGGTGAACTTTCGGATTCAGTGTACTTGAATATAGAGTTCTGGCGCTTGTCCTTTCTTAAGGACGCATATTCTAGTGGAACTAACGTTACTGAAGAAGGTCTGGATGTCACACCTAATTCCAGCCTGAAGGCTTTGAATCGGGAGAGGAAAATGCTAAGTGGTTATGTACATAAGAAGTTTTCGAGGAAGGAAAGAGAGGAACTGTACAAGAAGTGGCGTATTGATTTGAAGACTAAGCACAGAAGTATACAATTGGCATGGCTCCTATGGACCAATACAAAAGACTTGAACCATGTAAGGGAAAGTGCAAAGCTTGTAGCAAAGCTGGTTGGTTTTATAGACTCAGGTGAAGTCTCAAAGAAGCTTTTTGGATTTGGCTTCTTAGGCAAACTTAAGAGCAGAAAATCTCATGATTGGGAGGACTCAATATCCACTGCTACATAA 3324 0.4079 MREKGFREEHENVSLSNTTDEERIVVSIRVRPLNEKEKARHDVSELECVSNNTIRFKNNTVVEQRSLSNDAYTFDKVFGERCSTHQVYEQGIKEVALSVVSGINCSIFAYGQTSSGKTYTMTGITEYAVRDIYDYIGKHKEREFAVKFSAMEIYNEAVRDLLSANATPLRVLDDPEKGTVVEKLTEETLKDKNQLQELLFICAAERTTEETAMNETSSRSHQILRLTVESNPNDYARTARSGTLIASVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGTVIRKLSKERNGHIPYRDSKLTRILHNSLGGNARTAIICTISPARSQVEQSRNTLFFAGCAKQVATNAKVNVMISDKVLVKQLKNELARMENELRNSTPNTAILRERELQIEQMGKQIKELTRQRNLFQSHVENLLQTAGKDWPMRVDKDSGSELSCVSNSISPGTEHTFENLDKTTTTSISNEQLSQQNESFEGDFLLDGSPPAFVGPDPCQGWEEIASRAESEDNFKEVPCIEIKEMETDHIADVDTSIPDFEQGGNTPMIHVVNADAITKSPSRYGYSGLSHVALYHSTDALQEKTQDLHVDLLEKFNVSSEPEPHIFAAMSPPQTDKSDQETSSHPQFTELNNNQDALQQKNQDFHLELSVKSNGSSEPEPRISRSRNSRNRSSQPVLAGMSPSQTDEVDQETSSHPHFTKLDQKVVSPPQFNKLDQEPTSHPHFHEQEPKTILPPQSVKASHFDEQEVNSMFPPQSDESPHLHDHELKTVLRPQSDESPHFDEQEVKTMLPPQSEVSPHFDKQELKTMLASQSGELEQVSDKGYSNSLVGFYGELSESELHVIKRKSPQTYSLVEEMDASVEEESVVDSDTEETASVINYVTKMNGRAKSASLKNEFDDLMVRARTHEVNKHVNRVKGISFHGNWGSSMPSELERRQREIIELWDACNVPLAHRSYYFLLIKGELSDSVYLNIEFWRLSFLKDAYSSGTNVTEEGLDVTPNSSLKALNRERKMLSGYVHKKFSRKEREELYKKWRIDLKTKHRSIQLAWLLWTNTKDLNHVRESAKLVAKLVGFIDSGEVSKKLFGFGFLGKLKSRKSHDWEDSISTAT 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0081 1107 PANTHER CENTROMERE PROTEIN E 18 1104 - -
Lal4g0081 1107 MobiDBLite consensus disorder prediction 648 687 - -
Lal4g0081 1107 Coils Coil 800 820 - -
Lal4g0081 1107 MobiDBLite consensus disorder prediction 610 625 - -
Lal4g0081 1107 PANTHER KINESIN-LIKE PROTEIN KIN-7J 18 1104 - -
Lal4g0081 1107 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 MobiDBLite consensus disorder prediction 648 728 - -
Lal4g0081 1107 SMART kinesin_4 21 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 Coils Coil 356 383 - -
Lal4g0081 1107 Gene3D Kinesin motor domain 13 378 IPR036961 -
Lal4g0081 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 379 IPR027417 -
Lal4g0081 1107 Coils Coil 387 421 - -
Lal4g0081 1107 MobiDBLite consensus disorder prediction 600 625 - -
Lal4g0081 1107 ProSiteProfiles Kinesin motor domain profile. 23 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal4g0081 1107 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal4g0081 1107 MobiDBLite consensus disorder prediction 773 799 - -
Lal4g0081 1107 CDD KISc_CENP_E 24 347 - -
Lal4g0081 1107 Pfam Domain of unknown function (DUF3490) 930 1088 IPR021881 -
Lal4g0081 1107 Pfam Kinesin motor domain 29 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0081 Lal-Chr4 483504 499278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0081 21 377 Miscellaneous Gene Families AT5G06670 39.560 9.87e-72 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0081 K11498 - gmx:100802097 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0081 4 483504 499278 Lal15g1502 15 17142511 17148558 ECH
Lal4g0081 4 483504 499278 Lal23g1456 23 14921298 14927104 ECH
Lal4g0081 4 483504 499278 Lal4g0081 4 483504 499278 ECH