Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0145 ATGGGTTCTATTGGAGGGGAAGAGGCAATGCAACAAGGCCATGAGGAGAGAATTCTTGTGTCTGTTCGTCTTCGTCCTCTAAATGATAAGGAGCTTGCAAGAAAGGATGTATCTGAGTGGGAATGCACTAATGATACTACCATCATATGCAGGAACAACCTTTCAGCTTCTGATAGGTCCCTCTATCCAACAGCATATTCATTTGACAGAGTATTTCGGGGGGATTGCTCCACAAGGCAGGTGTACGAAGAAGCAGCGAAGGAAGTTGCGTTGTCGGTTGTAAGTGGCATAAACTCAAGCATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACCATGAGTGGTATAACTGATTATGCTGTAGAAGACATCTATAACTACATATATAAGCACCCGGAAAGACAATTTGTTTTGAAGTTTTCAGCAATTGAGATTTATAATGAATCTGTTAGGGACCTCCTTAGTGCAGACTCTTCTCCTCTCAGACTTCTTGATGATCCAGAGAGAGGAACAGTTATCGAGAAACTGATCGAGGAAACTTTGAGAGACTGGAACCATTTTACAGAACTTATTGCTTTCTGTGAAACTCAAAGGCAGATAGGGGAGACAACACTGAATGATGCAAGCTCTAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCTGCACTTGAATTCCGTGGAAATGACAAGTGTAGCTCTCTTGCTGCTTCAGTGAATTTTGTTGATCTTGCAGGAAGTGAGCGTGTATCCCAAACCAATTCAGCTGGTACGAGGTTGAAAGAGGGTTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATCCCTTTCAGAGATTCAAAGCTAACACGTATACTACAGTCCTCATTAGGAGGCAATGCTAGAAGTGCGATCATCTGCACCATGAGCCCTGCACGGAGCCATGTTGAACAAACCAGAAACACCCTCTTATTTGCATGCTGTGCTAAAGAAGTGGCAACCAATGCACAAGTCAATGTGGTGGTGTCTGATAAAGCACTAGTTAAGCAATTGCAAAAGGAGGTGTCTAGACTGGAAAGTGAATTGAGAAATTCAGGGACACCCCACCCTATATCTGATTCTGCAGTGCTATTGAGAGAAAAAGACCGTGAAATTGAGATGTTGAAAAAGGAGGTACAGGAGCTGACTTTAAAGCTGGACCGGGCACAATCTCAAATTAAGGACATGGCTCAAGTGGTTGAAGACGATGTGCCACATCTCCAGGAAAGCATGGATCTTCAATATCCCAAATTACGCGTGAGAAATACATGGGATTTTGAAAATCAATCCGACGAACCAAATGTATTAAGTGATGGTGAGGAGAGTATCAGGTCTTTTCATGCATCTCAATATTCAGATGGACACAGCATTAGTTCTGATGAGAACTTGTTCCAACTACCTGACCTTGAAAAGAATCTTCCTATCAGAAGTGCTTCCCCGGGACTATCTATTGCAAGCAGTGATGCTATAAGTAATGATTTGGATCCAAGGAACTTCGATGATCAGCATGAAGAGGAACATTGTAAGGTAGTTAGGTGCATTGAATCAGAAGATATAATTACAAACACACAGACACACTCAAAACAAGCAGATTTAAGCCCAAATAATACATACACTGACTCTAATACATCATCTCCTGCTGCAAATTCAGCTAACTCAGGAGTGACTGTAGTTGATAATGGAGACAAGAAAAATATTTATTTGACTTCTTCTGAGTTGAAGGAAGACAAAAGATTGGATTACTTGCGCCAAGATTTTGCACTTCCCTCAACAGAAAACATTTCTCCTTGGCTCACAAGATACAGTTCATTTAGTCATAGAACCATGAAGTTGAGCAGAAGTAGAAGTTGTAAAGCAAATATCATGAAAAGTTCATCTTCAGATTGGTTTGAGATGGAAGAAATAATGCAGAACACACCTCAAACGGGGGATGAAAAAGATTTCCCCGGAAGACCTGAGAGGTTTCAAAGGAAGTTTTACACACTAAATTATGATGCCGATCCTGAGAGAAAGTCATTGGATAGCTATATAAGTTTTGTGGGTGACGCACAGAATGCGGAATCCTCCACTAACAAGGAATCTGAGAACAATAGTGAATTAGCTCCAAGAGGAAAGGCAACGGAAAATAAAAGTTTGAATTTAATGGCCGACCATGAGGTTACAGAGAAAGGAACGAATCCAATCATTATCACTACTAAGGAATTCAAAGATGTAGGGTTGGACCCAATGCAAGCTGATGTAGAAAATCATTCAAACTGGCCTTCAGAGTTTAAGAGGCTGCAAAGAGAGATTGTTGAACTTTGGGATGCTTGTAATATTTCATTGATTCACAGGACTTACTTTTTCCTTCTTTTCAAAGGGGATCCATCAGATTCTATTTACATGGAAGTAGAGCTCAGAAGGCTATCCTATATTAAGCAAACTTTTTCCCAAGGAAATCAGATTGTTGAAAGTGGACGTACCCTTACCCTTGACTCAAGCATAAGAAATGTGAGAAGAGAGAGGCAAATGTTGAGCAAGCAAATAGAGAGGCGGCTATCTAAGTCAGAAAGAGAGAACCTATACTTGAAATGGGGACTTCGTTTGAGTTCAAAGCATAGGAGGTTACAGTTATCACATCGATTATGGAGTGAAACAAAAGATATGGAGCATGCTAGAGACAGTGCAGACATTGTTGCAAAACTAGTTGGTTCTGTAGAGCCACATCGGGCTTTTAAGGAGATGTTTGGACTTAACTTTGCCCCACGACCCACTAGTAAGAAATATTTTGGTTGGACAGCAAGTATGAAGAATATTTTGTTGTGA 2871 0.4072 MGSIGGEEAMQQGHEERILVSVRLRPLNDKELARKDVSEWECTNDTTIICRNNLSASDRSLYPTAYSFDRVFRGDCSTRQVYEEAAKEVALSVVSGINSSIFAYGQTSSGKTYTMSGITDYAVEDIYNYIYKHPERQFVLKFSAIEIYNESVRDLLSADSSPLRLLDDPERGTVIEKLIEETLRDWNHFTELIAFCETQRQIGETTLNDASSRSHQILRLTIESSALEFRGNDKCSSLAASVNFVDLAGSERVSQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARSAIICTMSPARSHVEQTRNTLLFACCAKEVATNAQVNVVVSDKALVKQLQKEVSRLESELRNSGTPHPISDSAVLLREKDREIEMLKKEVQELTLKLDRAQSQIKDMAQVVEDDVPHLQESMDLQYPKLRVRNTWDFENQSDEPNVLSDGEESIRSFHASQYSDGHSISSDENLFQLPDLEKNLPIRSASPGLSIASSDAISNDLDPRNFDDQHEEEHCKVVRCIESEDIITNTQTHSKQADLSPNNTYTDSNTSSPAANSANSGVTVVDNGDKKNIYLTSSELKEDKRLDYLRQDFALPSTENISPWLTRYSSFSHRTMKLSRSRSCKANIMKSSSSDWFEMEEIMQNTPQTGDEKDFPGRPERFQRKFYTLNYDADPERKSLDSYISFVGDAQNAESSTNKESENNSELAPRGKATENKSLNLMADHEVTEKGTNPIIITTKEFKDVGLDPMQADVENHSNWPSEFKRLQREIVELWDACNISLIHRTYFFLLFKGDPSDSIYMEVELRRLSYIKQTFSQGNQIVESGRTLTLDSSIRNVRRERQMLSKQIERRLSKSERENLYLKWGLRLSSKHRRLQLSHRLWSETKDMEHARDSADIVAKLVGSVEPHRAFKEMFGLNFAPRPTSKKYFGWTASMKNILL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0145 956 MobiDBLite consensus disorder prediction 706 726 - -
Lal16g0145 956 PANTHER CENTROMERE PROTEIN E 5 955 - -
Lal16g0145 956 Gene3D Kinesin motor domain 8 372 IPR036961 -
Lal16g0145 956 PRINTS Kinesin heavy chain signature 96 117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 PRINTS Kinesin heavy chain signature 205 222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 PRINTS Kinesin heavy chain signature 241 259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 PRINTS Kinesin heavy chain signature 291 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 374 IPR027417 -
Lal16g0145 956 SMART kinesin_4 15 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 ProSitePatterns Kinesin motor domain signature. 240 251 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal16g0145 956 CDD KISc_CENP_E 18 341 - -
Lal16g0145 956 Coils Coil 350 370 - -
Lal16g0145 956 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 5 955 - -
Lal16g0145 956 Coils Coil 387 421 - -
Lal16g0145 956 MobiDBLite consensus disorder prediction 546 578 - -
Lal16g0145 956 MobiDBLite consensus disorder prediction 706 730 - -
Lal16g0145 956 Pfam Kinesin motor domain 23 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 ProSiteProfiles Kinesin motor domain profile. 17 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g0145 956 MobiDBLite consensus disorder prediction 502 522 - -
Lal16g0145 956 Pfam Domain of unknown function (DUF3490) 778 937 IPR021881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0145 Lal-Chr16 870349 885569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0145 15 371 Miscellaneous Gene Families AT5G06670 44.353 1.17e-85 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0145 K11498 - gmx:100809766 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0145 16 870349 885569 Lal15g1502 15 17142511 17148558 LSH
Lal16g0145 16 870349 885569 Lal23g1456 23 14921298 14927104 LSH
Lal16g0145 16 870349 885569 Lal15g1502 15 17142511 17148558 PCT
Lal15g1502 15 17142511 17148558 Lal16g0145 16 870349 885569 PCT