Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1693 ATGTCGCCGACTGTAATGGGTCCTCCATTGCCGAAATCATCGTCGGTGTCGTTGGTGAGCTCCGACAACGTTTCAGATAGATTGAGTGATCAATTCGAAGACCTTAGAAGTTTGCAGTGGCGTATAAATCTCGGGGTTTTGCCTTCTTCTCCTTCAACTTCCATTGATGATCTTCGTCGCACCACCGCTGATTCTAGAAGGAGGTATGCCAGTTTGAGAGGACACCTCCTGGTTGATCCACATATTTCAAAGGATGGAAGTAGATCACCCTCACCCAATCTTATCATAGATAACCCACTCTCACAAAATCCAGATAGTACATGGGGTCGCTATTTTCGCAATGCAGAGCTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGCTATTTCCAGACACCAGGATGCCAAGGCACTTTGAGACGAATTTTATTATTATGGTGTCTGAGACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAGTTACTTGCTCCACTTCTTTATGTTTTGCAAGTGGATGTCGAGAGTCATTCAGATGTTCGAAAAGTTTATGAAGATCACTTCACTGACAGATTTGATGGCCTTTTTTGTCAAGAAAATGATCTTTCTTACAACTTCGATTTTAGAAAATCTCCAGACTTGATGGATGATGAAATTGGCTCACATGGAAATGCAATGAAAATCAAGACTCTTGATGAGCTTGATCCTAAGATAAGGACCATTGTATTGCTAAGTGATGCTTATGGGGCTGAAGGTGAACTTGGCATTGTTTTATCTGAGAAGTTCATGGAGCATGATGCTTATTGTATGTTTGATGCTTTAATGAATGGGTCTCGTGGTTCAGTTGCAATGGTCGATTTCTTCTCCTATTCTCCTCTAGCTGGGTCCCATAGTGGCTTGCCTCCTGTAATTGAAGCTTCAACTGCATTGTATTATTTGTTGTCTTGTGTGGATTCATCACTGCATAGCCATCTTGTTGATCTTGGTGTTGAACCCCAGTACTTTGCTCTCCGCTGGTTGCGAGTTTTATTTGGTCGGGAATTTTCACTTGCCAACCTGTTGATCATCTGGGACGAGATTTTTTTATCAGATAATGATAAGGTGGTAAAGTGTGCTGAGGACAACACTGACTCTGGTTTTAATATCTTTCATTCATCTCGTGGAGCATTTATCTCTGCTATGGCTGTAGCAATGTTACTTCATTTAAGAACTTCACTACTCGCCACTGAAAATCCTACGACCTGTCTCCAGAGATTACTAAGCTTCCCTGAGAAGACTAATATTAAGAAACTACTAGAGAAGGCAAAATCCTTGCAAGCTCTTGCATTGAGTTCTGATATTTCATCCTCAACACCTTCATTTGTAGGAGGTCACAACCAAGGTAAATCAATTATTACAAGATCTCGGACCCTTCCATCTGAATCAGATTCTCCAAAAACTCCTCTGAATTTGTTTCCTGATAGCTACTGGGAAGAACAGTGGAGAGTTGTCCACAAGGCTGAGGAACATAAGAAAGATGAATTACAAAAACAGGTTCCAACTCGTAAAAAGGGATGGACGGAAAAGGTAAAGTTGAGTTTGAAAAGAGCAGAATCCCATCCATTTTCATCAACAATTAAGACTGGTAAAAAGGAATCTGAGGTAAATGTTAGGCACAATTTGTTAGAAGACCTTTCTAAGGAACTAGGCTTTGAAGAAGATACAGAAAAACTGCACTGTCATGAATTTGTATGCCAGCAGGATAATCTTTCTGTGGCAGGTGAAGTGGAGCAAGAAAGTGATGGTTCTGAAGGCTGCAACAGTTATTCTGCCGATGATAGATGTCTGAGTGGAAACATTGGCAGTGAGGAAAACTTGTCTATAACTTCTGGTCTTGCTAGTCCTCCTAATGAGGCCAATGATCATGAAAATTACTTGGGGAAAAGTAGTGTTGGGTCTAACTTATTTCTTGATGAAATTAATGAAATTACAAATATCAGTCCTGTAGATTCACCTCTTCCAATCTCTGATCCTCCTGAGTGCATATCTCAGACATCAGGGTGCAAAAATGATTCCATGGGAAATTTGGCTACAAATGCTAAGGAGAGAAAAGTGAATAAATTTCAGTGGCTTTGGAAGTTTGGGCGGAATAATGGCCAAGTTATATCTGAGAAAGGAGAAGGTGTTTCTGAGGCTGTAAAACCTACGAACAAGAAATATAATGATCGTAGTACAACATCCTCTTCTACAGCCGACGCAAATTGTAGTTCTGTAAGTTGCAATGGGGATTCTGTGGATCAGAATGAGATGAGGACTTTGAGGAATATTGGTCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTATCCAACTAGAGCCGGGCGATAACTTGTCTAAATATGTTCTGGTTACCACAGGGCAAGTTACTGCCATGACAGCTCTAAAGGAGCTTCGTAAAATTAGCGATCTTCTATCTGAGATGTGA 2487 0.4093 MSPTVMGPPLPKSSSVSLVSSDNVSDRLSDQFEDLRSLQWRINLGVLPSSPSTSIDDLRRTTADSRRRYASLRGHLLVDPHISKDGSRSPSPNLIIDNPLSQNPDSTWGRYFRNAELERMVDQDLSRLYPEHGSYFQTPGCQGTLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVESHSDVRKVYEDHFTDRFDGLFCQENDLSYNFDFRKSPDLMDDEIGSHGNAMKIKTLDELDPKIRTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGSRGSVAMVDFFSYSPLAGSHSGLPPVIEASTALYYLLSCVDSSLHSHLVDLGVEPQYFALRWLRVLFGREFSLANLLIIWDEIFLSDNDKVVKCAEDNTDSGFNIFHSSRGAFISAMAVAMLLHLRTSLLATENPTTCLQRLLSFPEKTNIKKLLEKAKSLQALALSSDISSSTPSFVGGHNQGKSIITRSRTLPSESDSPKTPLNLFPDSYWEEQWRVVHKAEEHKKDELQKQVPTRKKGWTEKVKLSLKRAESHPFSSTIKTGKKESEVNVRHNLLEDLSKELGFEEDTEKLHCHEFVCQQDNLSVAGEVEQESDGSEGCNSYSADDRCLSGNIGSEENLSITSGLASPPNEANDHENYLGKSSVGSNLFLDEINEITNISPVDSPLPISDPPECISQTSGCKNDSMGNLATNAKERKVNKFQWLWKFGRNNGQVISEKGEGVSEAVKPTNKKYNDRSTTSSSTADANCSSVSCNGDSVDQNEMRTLRNIGQSMLEHIQVIESSIQLEPGDNLSKYVLVTTGQVTAMTALKELRKISDLLSEM 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1693 828 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 30 763 - -
Lal14g1693 828 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 306 445 IPR035969 -
Lal14g1693 828 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 102 286 - -
Lal14g1693 828 MobiDBLite consensus disorder prediction 81 100 - -
Lal14g1693 828 Pfam Rab-GTPase-TBC domain 118 176 IPR000195 -
Lal14g1693 828 Pfam Rab-GTPase-TBC domain 269 371 IPR000195 -
Lal14g1693 828 ProSiteProfiles TBC/rab GAP domain profile. 30 370 IPR000195 -
Lal14g1693 828 MobiDBLite consensus disorder prediction 667 687 - -
Lal14g1693 828 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 30 763 - -
Lal14g1693 828 Gene3D - 309 452 - -
Lal14g1693 828 SMART tbc_4 27 416 IPR000195 -
Lal14g1693 828 MobiDBLite consensus disorder prediction 7 21 - -
Lal14g1693 828 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 34 330 IPR035969 -
Lal14g1693 828 MobiDBLite consensus disorder prediction 1 21 - -
Lal14g1693 828 MobiDBLite consensus disorder prediction 738 757 - -
Lal14g1693 828 MobiDBLite consensus disorder prediction 735 757 - -
Lal14g1693 828 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1693 Lal-Chr14 17102712 17107351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1693 K18469 - gmx:100816501 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1693 14 17102712 17107351 Lal14g1693 14 17102712 17107351 ECH
Lal14g1693 14 17102712 17107351 Lal19g1245 19 15670352 15674894 LSH
Lal14g1693 14 17102712 17107351 Lal17g1563 17 17064086 17069274 PCT
Lal14g1693 14 17102712 17107351 Lal21g1232 21 15368167 15373714 PCT
Lal17g1563 17 17064086 17069274 Lal14g1693 14 17102712 17107351 PCT
Lal21g1232 21 15368167 15373714 Lal14g1693 14 17102712 17107351 PCT