Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1675 ATGGCCAAGAACTACCCTTTTCCTACATACTTGATTCCACTGTTAATAACCACAACCCTTTTGATATCCACAGTGAGCAAAACCAAGGGATGGAAAACAATGCTACCACCCATTGATGAAAGCATATCTCAAAATCTCCGCGACGATATCGAAACCATTCAATTGGCTTCTAAAGACTATGGAAACATGATGCAAGAATTCCCAGCAGCTGTGTTTCATCCATCTTCTATAAATGACATAGCAAGATTGATAAAACTCTCATACAATAGCTCTGTCCCTTTCACTATAGCTGCAAGGGGACAAGGCCACTCAATTAGTGGACAAGCCATGGCTCGTGATGGTGTTGTAGTTGATATGGCAAGTTTCAGAAAACAAAGAAATGGGGTTGGAATTATTGTTCATGAGGACCCTTTTATTGGTTATTATGCTGATGTTGGAGGTGAACAACTTTGGATTGATGTACTGCATAAAACGCTTGAACATGGAGTTGCACCGGTTTCTTGGACTGATTATTTGTACTTGACTTTGGGAGGAACCCTTTCCAATGCTGGGATTAGTGGCACCACATTCCGCTATGGACCTCAAATCAGCAACGTTCAGGAAATGGATGTGATTACAGGAAAGGGAGATTTGGTGACGTGCTCTTCTCAAGAGAATTCAGAGTTATTTCACGCAGTTCTTGGAGGATTAGGCCAATTTGGAGTTATAGCAAGGGCAAGAATCGTTCTTGAGCCAGCACCTAAAAGGGTTAAGTGGGTCAGACTACTCTATAGTGACTTTTCTGATTTTACCAAAGACCAGGAACGATTAATTTCAATGAATAATGGAATAAGGACAAAACATATTGCATTGGATTATTTGGAAGGGATGCTACTAATGCACCAAGGTCCCATAAACAATTGGAGATCCTCTTTCTTCCCTCTATCTGAACATCCCAGAATAGCTTCTTTAATCACTAAACATAACATCATTTACTGTCTTGAAGTGGCTAAATATTATGATGACCAATCCCAAAAAAATGTGAATAAGGGAATTCAAGATTTACTCCAAGGACTGGGCTATATCCCAGAATTTTATTATGAGAAAAATGTCACATTTGTTGAGTTCTTGAATAGAGTAAGAAGTGGAGAGCTGAAGCTTCAGTCTCAAGGATTATGGGATGTTCCTCATCCATGGCTTAATATGTTTATACCAAGGTCTCAAATCATGGATTTTAATTCAGGTGTATTCAATGATATTATTCTTAAAAGAAACATCACAAACGGACCTGTCTTAGTTTACCCCATGCATAGAAGCAAGTGGGATGATAGAATGTCAGCATCTATACCAGATGAAGATATATTCTACACAATTGGATTTTTGCACTCAAGTGGGTTTCATAATTGGAAAGAATTTGATGATCAAAATAGAGACATTTTGCAGTTTTGTAGTGATGCTGGCATTAAGGTTAAGCAATATTTTCCCCATTACAACACACAGGAAGATTGGGCCAACCATTTTGGCATTAAATGGAGGAGTTTTGTAGAGAGAAAATATCAGTTTGATCCAAGAATGACTTTATCTCCAGGACAAAAAATCTTTGAGAACAATCAAAAGCAGCGTTTAAAATCCTTTCCACAATGA 1623 0.3826 MAKNYPFPTYLIPLLITTTLLISTVSKTKGWKTMLPPIDESISQNLRDDIETIQLASKDYGNMMQEFPAAVFHPSSINDIARLIKLSYNSSVPFTIAARGQGHSISGQAMARDGVVVDMASFRKQRNGVGIIVHEDPFIGYYADVGGEQLWIDVLHKTLEHGVAPVSWTDYLYLTLGGTLSNAGISGTTFRYGPQISNVQEMDVITGKGDLVTCSSQENSELFHAVLGGLGQFGVIARARIVLEPAPKRVKWVRLLYSDFSDFTKDQERLISMNNGIRTKHIALDYLEGMLLMHQGPINNWRSSFFPLSEHPRIASLITKHNIIYCLEVAKYYDDQSQKNVNKGIQDLLQGLGYIPEFYYEKNVTFVEFLNRVRSGELKLQSQGLWDVPHPWLNMFIPRSQIMDFNSGVFNDIILKRNITNGPVLVYPMHRSKWDDRMSASIPDEDIFYTIGFLHSSGFHNWKEFDDQNRDILQFCSDAGIKVKQYFPHYNTQEDWANHFGIKWRSFVERKYQFDPRMTLSPGQKIFENNQKQRLKSFPQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1675 540 Pfam FAD binding domain 68 215 IPR006094 GO:0050660
Lal14g1675 540 ProSiteProfiles PCMH-type FAD-binding domain profile. 64 246 IPR016166 GO:0071949
Lal14g1675 540 Gene3D - 119 248 IPR016169 -
Lal14g1675 540 PANTHER GULONOLACTONE OXIDASE 13 527 - -
Lal14g1675 540 SUPERFAMILY FAD-linked oxidases, C-terminal domain 247 527 IPR016164 GO:0003824|GO:0050660
Lal14g1675 540 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 13 527 - -
Lal14g1675 540 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 68 103 IPR006093 GO:0016491
Lal14g1675 540 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 247 527 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal14g1675 540 Gene3D - 249 486 IPR016170 -
Lal14g1675 540 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 245 IPR036318 GO:0050660
Lal14g1675 540 Gene3D - 51 527 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1675 Lal-Chr14 16957630 16961946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1675 K00279 - gmx:100787676 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1675 14 16957630 16961946 Lal14g1675 14 16957630 16961946 ECH
Lal14g1675 14 16957630 16961946 Lal17g1531 17 16717376 16724122 PCT
Lal14g1675 14 16957630 16961946 Lal21g1201 21 14854675 14860697 PCT
Lal14g1675 14 16957630 16961946 Lal4g1545 4 19588734 19593706 PCT
Lal17g1531 17 16717376 16724122 Lal14g1675 14 16957630 16961946 PCT
Lal21g1201 21 14854675 14860697 Lal14g1675 14 16957630 16961946 PCT
Lal4g1545 4 19588734 19593706 Lal14g1675 14 16957630 16961946 PCT