Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1409 ATGGCTGAAGATGCTCCAAACACAACACCAATAACAACAACAACAACAGTAACTAAACAACAACAAGAAGAAGTAGTAGTATTGGTAACTGATGTTGTTGCTGACAAACCAGAAAGTGCTAGTGTTGTTGCTGATGAGGTAGAGAAGGAGAAACCATTGAATCCTCTGGTTGAGGAAAGTGTTACTTTGGGTTCTCATCTCTCCAGACCCAACAATGATCAGAAACTACCTGAACCTGAACCCGCTTCATTGAAGGAAGAAACTACTAAACTTTCTATTGAGAGCAAGGCACTTCAAGAGCTTAAGCAGCTCATTCAGGAAGCACTTCGAAACCATCACTTCTTTTCCCCACTCACCAAGGAACAACATGACAAGAAAGAGAAACAACCTGAACCAAAACTAGAAACTAAAACAGCAGATGAAGTTGTAACAAAGACAGAAGAAGGAGGAGAAGAAAAGAAGGAACAAGTGGAAGAAACTGAGGTTGTTGCTGAAGTCAAAGAAGCTGTGTCTGTTGTTGCTGTTGCTGTGGATGCTCTTTCAGCTGTAGATGAAGATGGAGCAAAAACTGTGGAGGCAATTGAAGAAACCGTTGTTTCTTCTGTTCAATCAGAACAACCACAACCTGAGGAGGAAGTTTCTGAGGCTGAAACAAAAGAAACAAATAAGGTTGATGAAGCTTCTTCTACACCATTGGCACCAGAACAAGTATCGATATATGGTGTACCACTCCTTGCAGATGAGAAAAGTGATGTGATTCTGTTGAAGTTCCTTCGTGCCAGAGACTTCAAGGTGAAGGAAGCTTTCACCATGATCTCCAACACAATTCGGTGGAGAAAGGAGTTTGGGATTGATGAATTGGTGGAAGAGAATTTGGGTGATGAATTGGAGAAAGTGGTGTACATGCATGGATTTGATAAGGAAGGTCACCCTGTGTGTTACAACATATATGGAGAATTCAACAACAAGGATCTTTACAAGAAAACCTTTTCTGACCAGGAGAAGAGGGACAAGTTCATGAGGTGGAGAATTCAGTTCTTGGAGAAGAGTATTAGGAAACTTGATTTCAACCCTGGTGGCATATGCACCATTGTTCAGGTTAATGATCTCAAGAATTCTCCTGGACCTGGTAAATGGGAACTTAGACAAGCTACCAAACAAGCCCTTCAATTGCTTCAGGATAATTATCCTGAATTTGTAGCCAAACAGGTGTTCATCAATGTGCCATGGTGGTACCTGGCAGTGAATAGAATGATAAGCCCTTTTCTTACTCAGAGAACCAAAAGCAAGTTTGTATTTTCAGGGCCTTCCAAATCAGCTGAGACCCTTTTAAGTTACATAGCTCCAGAGCAACTTCATGTGAACCATGGTGGACTAAGCAAAGATAGAGAGTCTGAAAATACTGATGCTGTTATAGAAACCACTGTTAGGCCAGCAACAAAACAGACAGTGGAATTTCCTGTTACTGAGAATTGCTTACTCTCTTGGGAGGTGAGAGTAATTGGGTGGGAAGTAAGTTATGGTGCAGAATTTGTGCCAAGCTCAGAAGGAAGCTACACAGTAATAATCCAGAAGGCTAGAAAAGTTGCTTCATCAGAAGAGCCAGTGCTTTTGAACAGTTTCAAAGTTGGTGAACCAGGAAAAGTTGTTCTCACTATTGATAATCCAAGCTCTAAGAAGAAGAAGATCTTGTACCGTTTGAAGACAAAGCCTTCCCCCTGTGATTGA 1728 0.4132 MAEDAPNTTPITTTTTVTKQQQEEVVVLVTDVVADKPESASVVADEVEKEKPLNPLVEESVTLGSHLSRPNNDQKLPEPEPASLKEETTKLSIESKALQELKQLIQEALRNHHFFSPLTKEQHDKKEKQPEPKLETKTADEVVTKTEEGGEEKKEQVEETEVVAEVKEAVSVVAVAVDALSAVDEDGAKTVEAIEETVVSSVQSEQPQPEEEVSEAETKETNKVDEASSTPLAPEQVSIYGVPLLADEKSDVILLKFLRARDFKVKEAFTMISNTIRWRKEFGIDELVEENLGDELEKVVYMHGFDKEGHPVCYNIYGEFNNKDLYKKTFSDQEKRDKFMRWRIQFLEKSIRKLDFNPGGICTIVQVNDLKNSPGPGKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFSGPSKSAETLLSYIAPEQLHVNHGGLSKDRESENTDAVIETTVRPATKQTVEFPVTENCLLSWEVRVIGWEVSYGAEFVPSSEGSYTVIIQKARKVASSEEPVLLNSFKVGEPGKVVLTIDNPSSKKKKILYRLKTKPSPCD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1409 575 ProSiteProfiles GOLD domain profile. 468 569 IPR009038 -
Lal14g1409 575 SMART sec14_4 294 461 IPR001251 -
Lal14g1409 575 Pfam CRAL/TRIO, N-terminal domain 245 274 IPR011074 -
Lal14g1409 575 MobiDBLite consensus disorder prediction 1 20 - -
Lal14g1409 575 MobiDBLite consensus disorder prediction 41 55 - -
Lal14g1409 575 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 289 464 IPR001251 -
Lal14g1409 575 SMART CRAL_TRIO_N_2 250 275 IPR011074 -
Lal14g1409 575 PANTHER PATELLIN-1 1 575 IPR044834 GO:0008289
Lal14g1409 575 MobiDBLite consensus disorder prediction 198 231 - -
Lal14g1409 575 Gene3D - 211 476 IPR036865 -
Lal14g1409 575 Coils Coil 91 111 - -
Lal14g1409 575 Pfam CRAL/TRIO domain 298 458 IPR001251 -
Lal14g1409 575 MobiDBLite consensus disorder prediction 37 89 - -
Lal14g1409 575 CDD SEC14 295 459 IPR001251 -
Lal14g1409 575 Gene3D GOLD domain 477 569 - -
Lal14g1409 575 MobiDBLite consensus disorder prediction 115 159 - -
Lal14g1409 575 SUPERFAMILY CRAL/TRIO domain 299 462 IPR036865 -
Lal14g1409 575 SUPERFAMILY CRAL/TRIO N-terminal domain 94 291 IPR036273 -
Lal14g1409 575 PANTHER PATELLIN-3 PROTEIN 1 575 - -
Lal14g1409 575 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 471 569 IPR036598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1409 Lal-Chr14 15368884 15372354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1409 254 438 Acyl Lipid Metabolism Gene Families AT1G55840 27.041 2.43e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1409 - - gmx:100788197 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1409 14 15368884 15372354 Lal14g1409 14 15368884 15372354 ECH
Lal14g1409 14 15368884 15372354 Lal19g0981 19 13727897 13731741 LSH
Lal14g1409 14 15368884 15372354 Lal17g0789 17 5779087 5783789 PCT
Lal14g1409 14 15368884 15372354 Lal4g0658 4 4993492 4996897 PCT
Lal17g0789 17 5779087 5783789 Lal14g1409 14 15368884 15372354 PCT
Lal4g0658 4 4993492 4996897 Lal14g1409 14 15368884 15372354 PCT