Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1997 ATGGCAACCACGAACCCTTTTGATTTGTTGGGTGACGACGCTGAGGACCCTTCTCAGCTCATCGCCGCCGAGCAACTCAAGGCGGCGGCTGCTGCTGCGGCTGCCACCGCCGCTCCCAAGAAGGCGCCGGCTCAGCAGATCAAGCCGGCTCAGCTCCCTAGCAAGCCTCTTCCTCCGGCTCAGGCTGTGAGGGATGCCAGAAATGAGTCTGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGGGGACGTGGATTTGGACGTGGTCGTGGGTTTAGTCGTGACTCTTCCAATGACGAGAACTCATTCCCTACCAGCGGAGCTCCTTATAATCAGGTTTCTTTTGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGCGGTTATGGTGGACCACGAGGTCCTTACCGTGGTGGTGGTGGTCGTCGTGGAGGTTTCAGCAATGGTGAAACTGGTGAAGCTGAAGAAGGACGACCTCGAAGAGCATTTGATCGTCGCAGTGGGACTGGACGAGGAAATGAATTCAAACGTGAAGGTTCAGGACGTGGTAACTGGGGAGCCCAAACTGATGAACTTGCTCAGGTAACTGATGAGGTTGCGAATGAAACTGAAAAGAATTTGGGTGATGAGAAGCCTGCAGTTGAAGAAGATGTAGCTGATGGTAACAAGGACAGCCCTACTAATGAAACTGAAGAAAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATATGAAAAAGTGTTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGAGAGAAAGGTGGACACTAAAGAGTTTGAATCCATGCAGGCCTTATCAAGCAAGAAAGACAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAAGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCTGTGAGCATCACCGAGTTTCTGAAGCCTGCTGAGGGGGAAGCATACTATAACCCAGGACGTGGTAGGGGCCGTGGCCGTGGTTCACGAGGCGGAGGCGGTTACCATGGAAGTGCCACCAACAATGCACCTGCTCCATCCATTGAAGATCCCGGGCATTTCCCAACCTTGAGTGCCAAGTGA 1104 0.5145 MATTNPFDLLGDDAEDPSQLIAAEQLKAAAAAAAATAAPKKAPAQQIKPAQLPSKPLPPAQAVRDARNESVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSGAPYNQVSFEGDAGKSSERRGYGGPRGPYRGGGGRRGGFSNGETGEAEEGRPRRAFDRRSGTGRGNEFKREGSGRGNWGAQTDELAQVTDEVANETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGEAYYNPGRGRGRGRGSRGGGGYHGSATNNAPAPSIEDPGHFPTLSAK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1997 367 MobiDBLite consensus disorder prediction 151 176 - -
Gso9g1997 367 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 367 - -
Gso9g1997 367 MobiDBLite consensus disorder prediction 200 240 - -
Gso9g1997 367 MobiDBLite consensus disorder prediction 292 310 - -
Gso9g1997 367 Pfam Hyaluronan / mRNA binding family 157 264 IPR006861 -
Gso9g1997 367 Coils Coil 240 263 - -
Gso9g1997 367 MobiDBLite consensus disorder prediction 33 240 - -
Gso9g1997 367 Gene3D - 155 268 - -
Gso9g1997 367 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 367 IPR039764 GO:0003723
Gso9g1997 367 SMART HABP4_PAI_RBP1_2 157 265 IPR006861 -
Gso9g1997 367 MobiDBLite consensus disorder prediction 292 367 - -
Gso9g1997 367 MobiDBLite consensus disorder prediction 95 117 - -
Gso9g1997 367 MobiDBLite consensus disorder prediction 185 199 - -
Gso9g1997 367 Pfam Stm1 1 77 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1997 Gso-Chr9 44452228 44456471 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1997 K13199 - gmx:100807657 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1810 18 50626182 50630443 Gso9g1997 9 44452228 44456471 GST
Gso7g0974 7 12271376 12275661 Gso9g1997 9 44452228 44456471 PCT
Gso3g0945 3 33311981 33316372 Gso9g1997 9 44452228 44456471 PCT