Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0945 ATGGCGACTACGAATCCCTTTGATTTGTTGGGCGACGACGCCGAGGACCCCTCACAGTTGATCGCGGCGGAGCAACTGAAGGCCGCGGCAGCCGCGGCCACCGCGCCACCCAAGAAGGACCAGGCCAAGCCCGGAGCTCGCAGCGGCGCGCCGGCCCAGTTGCCATCGAAGCCGCTTCCTCCCTCTCAGGCTGTAAGGGAGGCTAAAAATGAAACTTCTTATGGCGGTCGTGGTGGTGGCCGAGGAGGTGGAAGAGGATTTGGACGCGGCCGTGGTGGCGGCGGTGGCTTTGGCCGTGATTTTTCCAATGATGATAACTCATCTGCCCCTGCTAACCAAGGATCTTTTGAAGGAGATTCTGGGAATCCCTCAGAAAGGCGCGGTTATGGTGGACCCCGTGGGCCCTACCGTGGTGGCGGCAGTGGACGTGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGCTGGTGATGAAGGACGTCCAAGAAGAGCATTTGAACGCCACAGTGGGACTGGACGAGGAAATGAATTCAAACGGGAAGGGTCTGGACGTGGTAACTGGGGTACACAGAATGATGACATTGCTGAGGTGACTGAGGAAGTGGTGAATGAAACTGAAAAGGTTCTTGCTGATGAGAAGCCTGTAGGAGAGGAAGATGCAGCAGAAGGAAACAAGGACAGTCCTGCTAATGAAAATGAAGAAAAGGAGCCTGAGGACAAGGAGATGACACTGGAAGAGTATGAGAAGGTGCTGGAAGAGAAAAGGAAGGCCCTGCAGGCTCAAAAAACTGAAGCAAGAAAGGTGGACATCAAGGAATTTGCATCCATGCAGCCACTGTCAAACAAGAAAGAAAATGATGAGATCTTTATTAAATTGGGATCTGACAAGGATAAGCGCAAAGATGCTTTGGAGAAGGAGGAGAAATCCAAGAAGTCTGTCAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACCCTGGTGGGCGCGGTCGGGGACGTGGCCGTGGTTCTAGAGGAGGTTACAGTGGAAATGCATACAGCAATGCTCCAGCTCCATCAATTGAGGATCCTGGGCACTTCCCATCCTTGGGTGGCAAGTGA 1107 0.5339 MATTNPFDLLGDDAEDPSQLIAAEQLKAAAAAATAPPKKDQAKPGARSGAPAQLPSKPLPPSQAVREAKNETSYGGRGGGRGGGRGFGRGRGGGGGFGRDFSNDDNSSAPANQGSFEGDSGNPSERRGYGGPRGPYRGGGSGRGRRGGFSNGEAGDEGRPRRAFERHSGTGRGNEFKREGSGRGNWGTQNDDIAEVTEEVVNETEKVLADEKPVGEEDAAEGNKDSPANENEEKEPEDKEMTLEEYEKVLEEKRKALQAQKTEARKVDIKEFASMQPLSNKKENDEIFIKLGSDKDKRKDALEKEEKSKKSVNITEFLKPAEGERYYPGGRGRGRGRGSRGGYSGNAYSNAPAPSIEDPGHFPSLGGK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0945 368 MobiDBLite consensus disorder prediction 101 120 - -
Gso3g0945 368 MobiDBLite consensus disorder prediction 31 241 - -
Gso3g0945 368 MobiDBLite consensus disorder prediction 199 241 - -
Gso3g0945 368 MobiDBLite consensus disorder prediction 258 368 - -
Gso3g0945 368 SMART HABP4_PAI_RBP1_2 160 268 IPR006861 -
Gso3g0945 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
Gso3g0945 368 Pfam Hyaluronan / mRNA binding family 160 267 IPR006861 -
Gso3g0945 368 Gene3D - 158 271 - -
Gso3g0945 368 MobiDBLite consensus disorder prediction 283 313 - -
Gso3g0945 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
Gso3g0945 368 Coils Coil 243 267 - -
Gso3g0945 368 MobiDBLite consensus disorder prediction 150 179 - -
Gso3g0945 368 Pfam Stm1 1 79 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0945 Gso-Chr3 33311981 33316372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0945 K13199 - gmx:100791259 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0974 7 12271376 12275661 Gso3g0945 3 33311981 33316372 GST
Gso3g0945 3 33311981 33316372 Gso18g1810 18 50626182 50630443 PCT
Gso3g0945 3 33311981 33316372 Gso9g1997 9 44452228 44456471 PCT