Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1810 ATGGCAACCACGAACCCTTTTGATTTGTTGGGTGACGACGCTGAGGACCCTTCTCAGCTCATCGCCGCCGAGCAACTCAAGGCGGCGGCTGCGGCCTCGGCGGCCACCGCGGCTCCCAAGAAGGCGCCGGCTCAGCAGAACAAGCCGGCTCAGCTCCCTACCAAGCCGCCTCCTCCGGCTCAGGCTGTGAGGGATGCCAGAAACGAGCCAGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGGGGACGTGGATTTGGACGTGGTCGTGGGTTTAGTCGTGACTCCTCGAATGATGAGAACTCATTCCCTACCAGCAGAGCTCCTTATAATCAGGGTCCTTTTGAAGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGCAGTTATGGTGGACCACGAGTTCCTTACCGTGGTGGTCGTCGTGGAGGTTTCAGCAATGGTGAAACTGGTGAAGGTGAAGACGGACGACCTCGAAGAGCATTTGATCGTCGCAGTGGGACTGGACGAGGAAATGAATTCAAACGTGAAGGTTCAGGACGAGGTAACTGGGGAACCCAAACTGATGAACTTGCTCAGGTAACTGATGAGGTTGTGAATGAAACGGAAAAGAATTTGGGTGATGAGAAGCCTGCAGTTGAAGAAGATGTAGCTGATGGAAACAAGGACAGCCCTACTAATGAAACCGAAGAAAAAGAGCCTGAAGATAAGGAAATGACTCTGGAGGAATATGAAAAAGTGTTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGAGAGAAAGGTGGACACTAAAGAGTTTGAATCCATGCAGGCCTTATCAAGCAAGAAAGATAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAAGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCCGTGAGCATCACTGAGTTTCTGAAGCCTGCTGAGGGGGAAGCATACTATAACCCAGGGCGTGGTAGGGGTCGTGGCCGTGGTTCACGAGGTGGAGGCGGAGGCGGAGGCGGAGGTGTTTACCGTGGAAGTTCCACCAACAATGCACCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCAAACTTGGGTGCCAAGTGA 1119 0.5183 MATTNPFDLLGDDAEDPSQLIAAEQLKAAAAASAATAAPKKAPAQQNKPAQLPTKPPPPAQAVRDARNEPVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSRAPYNQGPFEEGDAGKSSERRSYGGPRVPYRGGRRGGFSNGETGEGEDGRPRRAFDRRSGTGRGNEFKREGSGRGNWGTQTDELAQVTDEVVNETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGEAYYNPGRGRGRGRGSRGGGGGGGGGVYRGSSTNNAPAPSIEDPGHFPNLGAK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1810 372 MobiDBLite consensus disorder prediction 290 309 - -
Gso18g1810 372 Coils Coil 239 262 - -
Gso18g1810 372 MobiDBLite consensus disorder prediction 150 175 - -
Gso18g1810 372 MobiDBLite consensus disorder prediction 199 238 - -
Gso18g1810 372 Gene3D - 154 267 - -
Gso18g1810 372 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Gso18g1810 372 Pfam Hyaluronan / mRNA binding family 156 263 IPR006861 -
Gso18g1810 372 MobiDBLite consensus disorder prediction 179 198 - -
Gso18g1810 372 SMART HABP4_PAI_RBP1_2 156 264 IPR006861 -
Gso18g1810 372 MobiDBLite consensus disorder prediction 27 238 - -
Gso18g1810 372 MobiDBLite consensus disorder prediction 290 372 - -
Gso18g1810 372 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 372 - -
Gso18g1810 372 Pfam Stm1 1 77 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1810 Gso-Chr18 50626182 50630443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1810 K13199 - gmx:100814825 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1810 18 50626182 50630443 Gso9g1997 9 44452228 44456471 GST
Gso7g0974 7 12271376 12275661 Gso18g1810 18 50626182 50630443 PCT
Gso3g0945 3 33311981 33316372 Gso18g1810 18 50626182 50630443 PCT