Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0974 ATGGCGACTGCGAATCCCTTTGATTTGTTGGGTGACGACGCCGAGGACCCCTCGCAGTTGATCGCGGCGGAGCAGCTCAAGGCCGCGGCGGCCGCGGCCACGGCGCCGCCCAAGAAAGACCAGGCCAAGCCCGGAGCTCGTGGCGGCGCGCCGGCCCAGTTGCCGTCGAAGCCCCTCCCTCCCTCTCAGGCTGTGAGGGAGGCTAAAAATGAAACTTCTTACGGCAGCCGTGGAGGTGGCCGAGGAGGTGGAAGAGGATTTGGACGTGGTCGTGGTGGTGGTGGCGGCTTTGGCCGCGATTTTTCCAATGATGACAACTCATCAGCCCCTGCTAATCAAGGATCTTTTGAAGGGGATTCTGGGAATCACTCAGAAAGACGTGGTTATGGTGGACCTCGTGGGCCCTACCGTGGTGGTGGTGGTGGTCGCGGTCGTCGTGGAGGTTTTACCAACGGTGAAGTTGGTGAAGAAGGACGCCCAAGAAGAGCATTTGAACACCACAGTGGGACTGGACGAGGAAATGAATTCAAACGGGATGGCTCTGGACGTGGGAACTGGGGTACACAGAATGATGACATTGCTGTGGTTACTGAGGAAGTGGTGAATGAAACTGAAAAGAATTTTGCTGATGAGAAGCCTGCAGGCGAGGAAGATGCACCTGAAGGAAACAAGGACTGTCCTGCCAATGAAAATGAAGAAAAGGAGCCTGAGGACAAGGAGATGACACTGGAAGAGTATGAGAAGGTGCTGGAAGAGAAAAGAAAGGCCCTGCAGGCACAAAAAACTGAAGTAAGAAAGGTGGACATCAAGGAGTTTGCATCCATGCAGCCACTGTCTAACAAGAAAGAAAATGATGAGATCTTTATTAAATTGGGATCTGACAAGGATAAACGCAAAGATGCTCTAGAGAAGGAGGAGAAGTCTAAGAAGTCTGTCAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACTCTGGTGGGCGCGGTCGGGGACGTGGCCGTGGTTCTAGAGGAGGTTACAGTGGAAATGCATACAGCAATGTTCCAGCTCCATCAATTGAGGATCCCGGGCAATTCCCAACCTTGAGTGGCAAGTGA 1107 0.5321 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAAATAPPKKDQAKPGARGGAPAQLPSKPLPPSQAVREAKNETSYGSRGGGRGGGRGFGRGRGGGGGFGRDFSNDDNSSAPANQGSFEGDSGNHSERRGYGGPRGPYRGGGGGRGRRGGFTNGEVGEEGRPRRAFEHHSGTGRGNEFKRDGSGRGNWGTQNDDIAVVTEEVVNETEKNFADEKPAGEEDAPEGNKDCPANENEEKEPEDKEMTLEEYEKVLEEKRKALQAQKTEVRKVDIKEFASMQPLSNKKENDEIFIKLGSDKDKRKDALEKEEKSKKSVNITEFLKPAEGERYYSGGRGRGRGRGSRGGYSGNAYSNVPAPSIEDPGQFPTLSGK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0974 368 Pfam Stm1 1 79 IPR019084 -
Gso7g0974 368 Pfam Hyaluronan / mRNA binding family 160 266 IPR006861 -
Gso7g0974 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
Gso7g0974 368 MobiDBLite consensus disorder prediction 27 243 - -
Gso7g0974 368 MobiDBLite consensus disorder prediction 268 368 - -
Gso7g0974 368 Coils Coil 243 270 - -
Gso7g0974 368 MobiDBLite consensus disorder prediction 101 119 - -
Gso7g0974 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
Gso7g0974 368 MobiDBLite consensus disorder prediction 283 313 - -
Gso7g0974 368 MobiDBLite consensus disorder prediction 203 243 - -
Gso7g0974 368 SMART HABP4_PAI_RBP1_2 160 268 IPR006861 -
Gso7g0974 368 MobiDBLite consensus disorder prediction 150 179 - -
Gso7g0974 368 Gene3D - 158 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0974 Gso-Chr7 12271376 12275661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0974 K13199 - gmx:100805110 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0974 7 12271376 12275661 Gso7g0974 7 12271376 12275661 ECH
Gso7g0974 7 12271376 12275661 Gso3g0945 3 33311981 33316372 GST
Gso7g0974 7 12271376 12275661 Gso18g1810 18 50626182 50630443 PCT
Gso7g0974 7 12271376 12275661 Gso9g1997 9 44452228 44456471 PCT