Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1226 ATGGCTCACCCCACCTCATCATCAGGTCAATCCAATGATCTCACAAAAGAAGATTGCAAGGAAACAAGTTCAGTGGTTGTTTGCTTCGGGGAAATGTTAATAGACTTTGTTCCAATGGTGGGAGGAGTGTCACTGGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGTATCTCTAGACTAGGAAGTTCATCTGCTTTCATAGGCAAGGTTGGAGCAGATGAATTTGGGTACATGTTGGCTGACATTTTAAAGCAGAACAATGTTGAGACTTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGCGAACGTGAGTTCTTGTTTTTCCGCAATCCAAGCGCTGATATGCTCCTTCAAGAGTCAGAACTTGATAAAGATCTCCTAAAGAAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGCATTGCCAAAAACTCTGGTTGCATTCTATCATATGATCCAAATTTGAGATTGGCTCTATGGCCTTCTGCAGACGCCGCTCGGAAAGGCATAATGGATATATGGGATCAAGCTGATGTCATAAAGATAAGTGAGGATGAGATTACATTTTTGACTGGTGGTGATGATCCCTATGATGATAATGTAGTTTTGAAGAAACTTTTTCACCCAAATCTCAAGCTTTTAATCGTTACTGAAGGTTCACAGGGTTGCAGATATTACACCAAGGCATTTAAAGGCAGGGTTTCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGAGCTGGCGATGCATTTGTTAGTGGGATTTTACACTGCATAGCTTCTGACCAAACTATTTTTCAGGATGAGAAACGTCTTCGAAAGGCTTTATATTTTGCCAATGTATGTGGTGCCCTCACTGTAACTCAGAGAGGTGCAATTCCTGCACTACCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATTTAA 1041 0.4246 MAHPTSSSGQSNDLTKEDCKETSSVVVCFGEMLIDFVPMVGGVSLAEAPAFKKAPGGAPANVAVGISRLGSSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKDLLKKARIFHYGSISLIDEPCKSAHLAAMSIAKNSGCILSYDPNLRLALWPSADAARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRVSGVKVKPVDTTGAGDAFVSGILHCIASDQTIFQDEKRLRKALYFANVCGALTVTQRGAIPALPTKEAILQFLLEAAVI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1226 346 SUPERFAMILY Ribokinase-like 26 340 IPR029056 -
Gso9g1226 346 CDD bac_FRK 26 327 - -
Gso9g1226 346 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 56 80 IPR002173 GO:0016773
Gso9g1226 346 Pfam pfkB family carbohydrate kinase 26 332 IPR011611 -
Gso9g1226 346 Gene3D - 22 345 IPR029056 -
Gso9g1226 346 PRINTS Ribokinase signature 51 70 IPR002139 GO:0016301
Gso9g1226 346 PRINTS Ribokinase signature 206 221 IPR002139 GO:0016301
Gso9g1226 346 PRINTS Ribokinase signature 248 259 IPR002139 GO:0016301
Gso9g1226 346 PANTHER FRUCTOKINASE-7-RELATED 17 342 - -
Gso9g1226 346 PANTHER HEXOKINASE FAMILY MEMBER 17 342 - -
Gso9g1226 346 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 277 290 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1226 Gso-Chr9 35254456 35258872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1226 K00847 - gmx:100792618 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1605 16 36642846 36647157 Gso9g1226 9 35254456 35258872 GST
Gso9g1226 9 35254456 35258872 Gso20g1232 20 42335959 42339660 PCT
Gso9g1226 9 35254456 35258872 Gso10g2148 10 48506006 48509548 PCT
Gso20g1232 20 42335959 42339660 Gso9g1226 9 35254456 35258872 PCT
Gso10g2148 10 48506006 48509548 Gso9g1226 9 35254456 35258872 PCT