Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1605 ATGGCTCATCCCACCTCATCAGGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACGGTGGGAGGAGTGTCACTGGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGTGCACCTGCCAATGTGGCTGTTGGTATCTCTAGACTGGGAGGTTCATCTGCTTTCATAGGCAAGGTTGGAGCAGATGAATTTGGGTACATGTTGGGTAACATTTTAAAGCAGAACAATGTTGAGACGTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGAGAACGTGAATTCTTGTTTTTCCGCAATCCAAGCGCTGATATGCTCCTTCAAGAGTCAGAACTTGATAAAGATATCCTAAAGCAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGCATTGCCAAAAACTCTGGTTGCATTCTATCATATGATCCAAATTTGAGATTGGCTCTATGGCCTTCTGCAGACTCCGCTCGGAAAGGCATAATGGATATATGGGATCAAGCTGATGTTATAAAGATAAGTGAGGATGAGATTACATTTTTGACTGGGGGTGATGATCCTTATGATGATAATGTTGTTTTGAAGAAACTTTTTCACCCAAATCTCAAGCTTTTAATTGTTACTGAAGGTTCACAGGGTTGCAGATATTACACGAAGGCATTTAAGGGCAGGGTTGCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGAGCTGGCGATGCATTTGTTAGTGGGATTTTATACTGCATAGCTTCTGACCAAACTATTTTTCAGGATGAGAAACGTCTTCGAAAGGCTTTATATTTTGCCAATGTATGTGGTGCCCTCACTGTAACTGAGAGAGGTGCAATTCCTGCACTACCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.422 MAHPTSSGQSHDLKKEDCKETRSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLGNILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKDILKQARIFHYGSISLIDEPCKSAHLAAMSIAKNSGCILSYDPNLRLALWPSADSARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRVAGVKVKPVDTTGAGDAFVSGILYCIASDQTIFQDEKRLRKALYFANVCGALTVTERGAIPALPTKEAILQFLLEAAVI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1605 345 Gene3D - 20 344 IPR029056 -
Gso16g1605 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Gso16g1605 345 CDD bac_FRK 24 326 - -
Gso16g1605 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Gso16g1605 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Gso16g1605 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Gso16g1605 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Gso16g1605 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Gso16g1605 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Gso16g1605 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Gso16g1605 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1605 Gso-Chr16 36642846 36647157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1605 K00847 - gmx:100778752 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1605 16 36642846 36647157 Gso9g1226 9 35254456 35258872 GST
Gso16g1605 16 36642846 36647157 Gso20g1232 20 42335959 42339660 PCT
Gso16g1605 16 36642846 36647157 Gso10g2148 10 48506006 48509548 PCT
Gso20g1232 20 42335959 42339660 Gso16g1605 16 36642846 36647157 PCT
Gso10g2148 10 48506006 48509548 Gso16g1605 16 36642846 36647157 PCT