Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2148 ATGGCCCACTTTACCTCCTCAGGTAAATCAGACAATCTCACCAAAGAAGACTGTATTGGAAAAAGTGCGCTGGTTGTTTGCTTTGGTGAAATTTTAATAGACTTTGTGCCAACAGTGTGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGAATCTCTAGGCTTGGGGGTTCATCTGCCTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGTTGATATTTTAAAGAAGAACAATGTTGAGACATCTGGCATGAAGTTTGACCCTAATGCAAGAACTGCGTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGCGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTACTTCAAGAGTCAGAACTTGATGAAAATCTCATAAAGAAGGCTAAAATTTTCCATTATGGTTCCATCAGCTTGATTGATGAGCCATGCAAGTCTGCTCATCTTGCTGCTATGAGATTTGCTAAAGAATCTGGTTGCATTCTTTCATATGATCCAAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTAGGGATGGCATAATGAGTATATGGGATCAAGCTGATATCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACTGGTGGTGATGATCCTTATGATGATAATGTTGTATTAAATAAGCTTTTTCACCCTAATCTCAAGCTTTTAATAGTTACTGAAGGGTCAGAAGGTTGTAGATATTACACCAAGGAATTTAAGGGCAGGGTTGCTGGTGTTGAAGTTAAACCCGTAGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTATCTATAGCTTAGCTTCCGATCAAAGCCTTTTCCAGAATGAGGAGCATCTCCGAAAAGCTCTATATTTTGCCAATGTATGCGGTGCGATCACGGTAACAGAAAGAGGGGCAATTCCTGCATTACCTACAAAAGAAGCTGTTCTTCAATTCGCTGCAACATAA 1026 0.4123 MAHFTSSGKSDNLTKEDCIGKSALVVCFGEILIDFVPTVCGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLVDILKKNNVETSGMKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDENLIKKAKIFHYGSISLIDEPCKSAHLAAMRFAKESGCILSYDPNLRLALWPSAEAARDGIMSIWDQADIIKISEEEITFLTGGDDPYDDNVVLNKLFHPNLKLLIVTEGSEGCRYYTKEFKGRVAGVEVKPVDTTGAGDAFVSGIIYSLASDQSLFQNEEHLRKALYFANVCGAITVTERGAIPALPTKEAVLQFAAT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2148 341 CDD bac_FRK 24 326 - -
Gso10g2148 341 PANTHER CARBOHYDRATE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 14 338 - -
Gso10g2148 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Gso10g2148 341 PANTHER HEXOKINASE FAMILY MEMBER 14 338 - -
Gso10g2148 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Gso10g2148 341 Gene3D - 21 341 IPR029056 -
Gso10g2148 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Gso10g2148 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Gso10g2148 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Gso10g2148 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Gso10g2148 341 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2148 Gso-Chr10 48506006 48509548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2148 K00847 - gmx:100816740 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2148 10 48506006 48509548 Gso10g2148 10 48506006 48509548 ECH
Gso20g1232 20 42335959 42339660 Gso10g2148 10 48506006 48509548 GST
Gso16g1605 16 36642846 36647157 Gso10g2148 10 48506006 48509548 PCT
Gso9g1226 9 35254456 35258872 Gso10g2148 10 48506006 48509548 PCT
Gso10g2148 10 48506006 48509548 Gso16g1605 16 36642846 36647157 PCT
Gso10g2148 10 48506006 48509548 Gso9g1226 9 35254456 35258872 PCT