Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0580 ATGGCTGGAGTGACAAAGGAGGAAGAGAGGGGTAGTCCTAGTTGGGGTGCTTCATTTTTTACGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCCACTGCTATGAATTCTCAGAGGCCATCTGTGGTATATTCATTGAAAAATGATCATGGTGGCAGCCAACTTCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTAGCCCTCCAGAAGTTAAATATACAAATTACAATCCGGAAATCTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACACGGACCATAAGTCTTGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGCTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATGTTTTTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAGTCCCGTGTGGAAGTGGAACCCAATCTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGGCAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCCGTCTTTTGTATTTAGGCTACAGGGTGCGGATAATTCAACACTTTATGGGTGCTGTCTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTTCTCTCCCTGATTTCTGATAAGCAGTTGACTTATTCTCCTTTGAAACGCCAACGGCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTAAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGGGAAGTGTTGGAGATTTAAATTTAGAATATGTTGAAGGTAGCTGCGAGGAGGAAAATTTGGAGGAAAAATCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAATCCAAGGATTTCTCAATCAAGCCTAAGAAATTCCTCACCTGAAAACATTGAGGATGATAGTAATTATCCTGAGAAACACATTGTTAATGGGGATCTGCATACATTTAAGGAGAGAGTCAATGATGACAATGCCGTGCCTAGTGATCCTGAAACTGATAGAAAAACTGTCAAAGAATCTGGTCCTACAAATGCTGAAGATAGTGATTTGTATGGGGATGCTTTTGTAACAAACAAACAGTCTGAAGATAGGCGTTTACCAAATGCTATTCTACCACTCCTGCGCTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAGGATTTAAATGACCTAAATGATATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATTGCTTAGCTTGCCCTGCAAGGGACTCAGCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTGGAATATCACAGACCAGATGAGACAATTCTACATCTTGCCGGTTCAACTGTTGACTTGAAATCTTGCAGTACAGGTCTGGAATTTGCAGAGGCACATAATTCTCTTTTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCAGTTTTACCAAATGGCATGCTCGAGTTTCTGGATGCACCTGTCCCCTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGTCAGCAGAAACCAGGTGAAGTCATCAACAGTACCTCAACTGCCAAGTCAGAAAGAGTTAATCTCTTCTTTACGTCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGACAGAAGCTGCTAAGAGGTTCCTATCGGTGTTAAGGTCTTATTTGGATTCTCTTTGCTGTAACATTCGTTCTCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCGTTTCCTTATCGTGATCAGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTTCATACAGATATTGTTCTCTCTTTCTTCCAAAAGGAATAA 2427 0.4137 MAGVTKEEERGSPSWGASFFTQTTEDVARAVATAMNSQRPSVVYSLKNDHGGSQLQRLQYQVTKMIKGFSSPPEVKYTNYNPEILTTQKRQWAANFQLQYTDHKSWKEPTKLFESMVVAGLHPNCDIQALQRQCFLRKSEGPGKLRSALGYQNQSRVEVEPNLEPQVLFVYPPEKQLPLKGKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDPSFVFRLQGADNSTLYGCCLLVEELVQKPSGFLSLISDKQLTYSPLKRQRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTGSVGDLNLEYVEGSCEEENLEEKSECMLVNDRLEDRHDDNPRISQSSLRNSSPENIEDDSNYPEKHIVNGDLHTFKERVNDDNAVPSDPETDRKTVKESGPTNAEDSDLYGDAFVTNKQSEDRRLPNAILPLLRYSQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLNDILEWAKANNCGPLQIISEYYCLACPARDSALRFHPLEHLHPLEYHRPDETILHLAGSTVDLKSCSTGLEFAEAHNSLLAEEEATALSIWAVACMCGTLRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDVSRNQVKSSTVPQLPSQKELISSLRPYHETLVGESYLGRRRPVYECTEVQTEAAKRFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDQPFMKLFVDTQLFSVHTDIVLSFFQKE* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0580 808 Pfam uDENN domain 165 243 IPR005113 -
Gso9g0580 808 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 808 - -
Gso9g0580 808 Gene3D - 578 744 IPR043153 -
Gso9g0580 808 Pfam DENN (AEX-3) domain 570 681 IPR001194 -
Gso9g0580 808 SMART DENN_cls 275 682 IPR001194 -
Gso9g0580 808 MobiDBLite consensus disorder prediction 343 374 - -
Gso9g0580 808 MobiDBLite consensus disorder prediction 451 483 - -
Gso9g0580 808 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 808 - -
Gso9g0580 808 MobiDBLite consensus disorder prediction 386 410 - -
Gso9g0580 808 MobiDBLite consensus disorder prediction 386 421 - -
Gso9g0580 808 Gene3D - 103 310 - -
Gso9g0580 808 ProSiteProfiles Tripartite DENN domain profile. 148 808 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0580 Gso-Chr9 6854208 6868166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0580 - - gmx:100814801 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1462 15 16804311 16818796 Gso9g0580 9 6854208 6868166 GST
Gso13g0795 13 22272373 22285695 Gso9g0580 9 6854208 6868166 PCT
Gso17g0417 17 3798921 3811991 Gso9g0580 9 6854208 6868166 PCT
Gso9g0580 9 6854208 6868166 Gso13g0795 13 22272373 22285695 PCT
Gso9g0580 9 6854208 6868166 Gso17g0417 17 3798921 3811991 PCT