Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0795 ATGACTGGAATGTCAAAGGAAGAAGGGTCAGCTGGTCCTAGTTGGGGTGCTTCATTTTTTATGCAGACAAGAGAGGATGTGGTTAGAGCTGTTGCAGCTGCTGTTAACTCTCCACTGTCATCAAAAGATGATAACACTGGTAGCCAACTTCAAAGGCTGCAGTATCATGTTGCAAAAATGTTAAAAGGTTTTTCACACCCTCCTAATGTTGAAAACACAAATTATAATCCTGAAATCCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACATGGACCATAGGTCTTGGAAGGAGCCCTCACAACTGTTTGAGAGCATGGTGGTTGTTGGACTTCCTCCTAATTGTGATGTTCAGGCACTGCAAAGGCAATATGTTGATAGAAAGTTTGAAGGCTCTGGTAAATTGAGAAGTGCACTCGGTTATCAGAATCAATCTCGTGTAGAACCCAATATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAATGCAAGGATCTTATTTCTTTCTGCTTCCCTGGAGGCTTAGAGGTTTGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGAAAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTATCTCTGATTTCTGATAAGCAGCCTTCTTACTCGTCTTTGAGACGACATATATTAATCACTCAGAGATGTTACTGCATTCTTTCAAGGATCCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGTTGGAGATTTAAATTTAGAATTTGATGAAGGTAACCATAAGGAAGAAAACCTACAGGGCTACTTGGAGAGTGTTTTGGTGAGTGATGGACCAATAGAAGACAGACTTGGTGGAAATACAGTAATTTCTCAATCAAGAGTGAGAAAGTCTACACCTGAAAATATTGTGGATGATGGTCAATCAGAGCATCTAATGGTTGATGGGGAGCTGCAGACATATAAGGAGAGAATCAATTATGACGATGCTTTGCTTACTGATCCTGTAAATGATAGGACAACAGCCAAAGAAGATTCTGGGCCTGCAAATTCCGAAAATAGTGATCACTATGGAGATGCTTTTGCAACCAACAAACAATCAGATGACAAACATTTACCTAATGCTATTTTGCCCCTTCTGCGCTATTGCCAGTATGAAAGTTCTGAATCTTCCTGCAGTTTTCAAGGCTCGCCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAGGAAGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTAAATGATATTCTTGAGTGGGCCAAGGAAAATAACCATGGACCACTACAAATTGTAAGCGAGTTTTACCGTTTAAGTTGCCCTGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATCACAGATCAGCTGAGACAGTTCTACGTCTTGCTGATTCAACAGTTGATTTGAAAACGTCCAGTACTGGTCTGGGATTAGCTGATGCACACATTGCTCTTCTGGTGGAAGAGGCAAATGCATTATCTTTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCTTACCGGTGGCAAAGCCTGTTAATGCCAGTTTTACCAAATGACATGCTTGAGTTTTTAGATGCACCTGTCCCTTATGTAGTCGGTATTAAGAACAAGACCAGTGAAGTTCAGTCAAAGTTTACCAATGTTATTCTGGTTGATGCCGATAGAAACCTGGTGAAGTCACCAACAGTTCCCCAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATGAAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAAAAGACCAGTATATGAATGCACAGAAGTGCAGATTGAAGCTGCGAAGGGGTTCCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTGTAACATCCGTTCTCACACAATCACCAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGACTCATTCCCATATCGTGATTGGCCTTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTGTATACAGACCTTGTTCTCTCTTTCTTACAAAAGGAATAG 2397 0.4101 MTGMSKEEGSAGPSWGASFFMQTREDVVRAVAAAVNSPLSSKDDNTGSQLQRLQYHVAKMLKGFSHPPNVENTNYNPEILTSLKRQWAANFQLQYMDHRSWKEPSQLFESMVVVGLPPNCDVQALQRQYVDRKFEGSGKLRSALGYQNQSRVEPNIEPQVLFVYPPEKQLPLKCKDLISFCFPGGLEVCAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGAENSTLYGCCVLVEELVQKPSGLLSLISDKQPSYSSLRRHILITQRCYCILSRIPAFELHFGVLNSIFTQERLERLTKGVGDLNLEFDEGNHKEENLQGYLESVLVSDGPIEDRLGGNTVISQSRVRKSTPENIVDDGQSEHLMVDGELQTYKERINYDDALLTDPVNDRTTAKEDSGPANSENSDHYGDAFATNKQSDDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIVSEFYRLSCPARGSSLTFHPLEHLHPLEYHRSAETVLRLADSTVDLKTSSTGLGLADAHIALLVEEANALSLWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSEVQSKFTNVILVDADRNLVKSPTVPQLPRQKELVSSLRPYHETLVGESYLGRKRPVYECTEVQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDWPFMKLFVDTQLFSVYTDLVLSFLQKE* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0795 798 MobiDBLite consensus disorder prediction 397 415 - -
Gso13g0795 798 MobiDBLite consensus disorder prediction 386 423 - -
Gso13g0795 798 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 798 - -
Gso13g0795 798 Gene3D - 569 734 IPR043153 -
Gso13g0795 798 SMART uDENN_cls 104 237 IPR005113 -
Gso13g0795 798 ProSiteProfiles Tripartite DENN domain profile. 142 798 IPR037516 -
Gso13g0795 798 SMART DENN_cls 266 672 IPR001194 -
Gso13g0795 798 Pfam uDENN domain 158 235 IPR005113 -
Gso13g0795 798 MobiDBLite consensus disorder prediction 444 474 - -
Gso13g0795 798 Gene3D - 95 328 - -
Gso13g0795 798 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 798 - -
Gso13g0795 798 Pfam DENN (AEX-3) domain 570 672 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0795 Gso-Chr13 22272373 22285695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0795 - - gmx:100795172 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0795 13 22272373 22285695 Gso17g0417 17 3798921 3811991 GST
Gso13g0795 13 22272373 22285695 Gso15g1462 15 16804311 16818796 PCT
Gso13g0795 13 22272373 22285695 Gso9g0580 9 6854208 6868166 PCT
Gso15g1462 15 16804311 16818796 Gso13g0795 13 22272373 22285695 PCT
Gso9g0580 9 6854208 6868166 Gso13g0795 13 22272373 22285695 PCT