Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0417 ATGACTGGAATTTCAAAGGAAGAAGGGTCAGCTAGTCCAAGTTGGGGTGCTTCATTTTTTATGCAGACAAGAGAGGAAGTGGCTAGAGCTGTTGCAGCTGCTGTTAACCCTCCAATGTCGTCAAAAGATGATAATAGTGGTAGCCAACTTCAAAGGCTGCAGTATCAAGTTGCAAAAATGTTAAAAGGCTTTTCTCACCCTCCTGATGTTGAAACAACAAATTACAATCCTGAAATCCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACATGGACCATAGGTCTTGGAAGGAACCTTCACGACTGTTTGAAAGCATGGTGGTTGTTGGACTTCCTCCTAATTGTGATGTTCAGGCACTGCAAAGGAAATATGTTGATAGAAAGTTTGAAGGCTCTGGTAAATTGAGAAGTGCACTCGGTTATCAGAATCAATCTCGTGTAGAACCCAATATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAGTGCAAGGATCTTCTTTCTTTCTGCTTCCCTGGAGGCTTAGAGGTCCGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTATGGGCAGGAACACCTTAAACAAAGGGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTTTCTCTGATTTCTGATAAGCAGCCTTCTTACTCGTCTTTGAGACGGCATATATTAACCACTCAGAGATGTTACTGCATACTTTCAAGGCTCCCAGCTTTTGATTTGCTCTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGTTTGACAAAAGGTGTTGGAGATTTAAATTTAGAATTTGATGAAGGTAACCATAAGGAAGAAAACCTAGAGGGCTACTCAGACAGTGTTTTGGTGAGTGATGAACCAATAGAAGACAGACTTGGTGGAAATATGGTAATTTCTCAATCAAGAGTAGGAAAGTCTACACCTGAAAATATTGTGGATGATGGTCAACCAGAGCATCTAATGGTTGATGGGGAGCTGCAGCCTTATAAGGAGAGAATCAATTATGATGATGTCTTGCTTACTGATCCTGTAAATGATAGGACAACAGCCAAAGAAGATTCTGGCCCTGCAAATTCTGAAAATAGTGATCACTATGGAGATGCTTTTGGAACCAACAAACAATCAGAAGACAAACATTTACCTAATGCTATTTTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGCTCGCCTTGTGAAGACCGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCCGGCCAAGAGGATTTAAACGACTTAAATGATATTCTTGAATGGGCCAAGGAAAATAACCACGGACCACTACAAATTGTAAGCGAGTTTTACCGTTTAAGTTGCCCTGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATCACAGATCAGCTGAGACAGTTCTACGTCTTGCTGGTTCAACAGTTGATTTGAAAACGTCAAGTACTGGTCTGGGATTAGCTGATGCACACATTGCTCTTCTGGTGGAAGAGGCAAATGCATTATCTGTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAATTTTATCAGTTATTCCACTAATCCAGCCTTACCGGTGGCAAAGCCTGCTAATGCCAGTTTTACCAAATGACATGCTTGAGTTTTTAGATGCACCTGTCCCTTATGTAGTCGGTATTAAGAACAAGACCAGTGAACTTCAGTCAAAGTTTACCAATGTTATTCTGGTTGATGCTGATAGAAACCAGGTGAAGTCACCAACAATACCCCAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATGCAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGACCAGTATATGAATGCACAGAAGTGCAGATTGAAGCTGCGAAGGGGTTCCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTATAACATCCGTTCTCACACAATCACCAATGTACAATCCAATGATGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGAGTCGTTCCCATATCGTGATCAGCCTTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTACATACAGACCTTGTTCTTTCTTTCTTACAAAAGGAATAG 2397 0.413 MTGISKEEGSASPSWGASFFMQTREEVARAVAAAVNPPMSSKDDNSGSQLQRLQYQVAKMLKGFSHPPDVETTNYNPEILTSLKRQWAANFQLQYMDHRSWKEPSRLFESMVVVGLPPNCDVQALQRKYVDRKFEGSGKLRSALGYQNQSRVEPNIEPQVLFVYPPEKQLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNEILYGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISDKQPSYSSLRRHILTTQRCYCILSRLPAFDLLFGVLNSIFTQERLERLTKGVGDLNLEFDEGNHKEENLEGYSDSVLVSDEPIEDRLGGNMVISQSRVGKSTPENIVDDGQPEHLMVDGELQPYKERINYDDVLLTDPVNDRTTAKEDSGPANSENSDHYGDAFGTNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIVSEFYRLSCPARGSSLTFHPLEHLHPLEYHRSAETVLRLAGSTVDLKTSSTGLGLADAHIALLVEEANALSVWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASILSVIPLIQPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSELQSKFTNVILVDADRNQVKSPTIPQLPRQKELVSSLRPYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIESFPYRDQPFMKLFVDTQLFSVHTDLVLSFLQKE* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0417 798 MobiDBLite consensus disorder prediction 397 415 - -
Gso17g0417 798 Gene3D - 95 302 - -
Gso17g0417 798 ProSiteProfiles Tripartite DENN domain profile. 142 798 IPR037516 -
Gso17g0417 798 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 798 - -
Gso17g0417 798 MobiDBLite consensus disorder prediction 444 471 - -
Gso17g0417 798 Gene3D - 568 734 IPR043153 -
Gso17g0417 798 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 798 - -
Gso17g0417 798 SMART DENN_cls 266 672 IPR001194 -
Gso17g0417 798 MobiDBLite consensus disorder prediction 392 422 - -
Gso17g0417 798 Pfam uDENN domain 158 235 IPR005113 -
Gso17g0417 798 SMART uDENN_cls 104 237 IPR005113 -
Gso17g0417 798 Pfam DENN (AEX-3) domain 558 672 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0417 Gso-Chr17 3798921 3811991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0417 - - gmx:100801645 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0417 17 3798921 3811991 Gso17g0417 17 3798921 3811991 ECH
Gso13g0795 13 22272373 22285695 Gso17g0417 17 3798921 3811991 GST
Gso17g0417 17 3798921 3811991 Gso15g1462 15 16804311 16818796 PCT
Gso17g0417 17 3798921 3811991 Gso9g0580 9 6854208 6868166 PCT
Gso15g1462 15 16804311 16818796 Gso17g0417 17 3798921 3811991 PCT
Gso9g0580 9 6854208 6868166 Gso17g0417 17 3798921 3811991 PCT