Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1462 ATGGCTGGAGTGACAAAGGAGGACGAGTCGGGTAGTCCTAGTTGGGGTGCTTCATTTTTTACACAGACAACAGAGGATGTGGCTAGAGCTGTTGCTGCTGCAATGAATTCTCCGAGGCCATCTGTGGTATATTCATCGAAAAATGATCATGGTGGAAGCCAACTTCAAAAGCTACAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTCGCCCTACAGAAGTTAAATATACAAATTACAATCCAGAAATCTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTACAGTACATGGACCATAAATCTTGGAAGGAGCCGACAAGGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATATTTTTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAATCCCGTGTGGAAGCGGAACCCAATTTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGATGCCTCTTAAAGACAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGCTACAGGGTGCTGATAATTCAACACTTTACGGGTGCTGTGTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTTCTCTCCTTGATTTCTGATAAGCAGGCGACTTATTCTCCTTTGAAACGCCAACGCCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGAGAATTGGTGGAGATTTAAATTTAGAATATGCTGAAGATAGCTGCGAGGAAGAAAATTTGGAGGAAAAATCTGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAATCCAATGATTTCTCAATCAAGCCTAAGAAATTCCTCACCTGAAAACATTGAGAATGATAGTAATTATCCCAAGAAACAAATGGTTAACGGGGATCTGCATACCTTTAAGGAGAGAGTCAATGATGACAATGCTGTGCCTAGTGATCCTGAAACTGATAGAAAAACTGTCAGAGAAGAATCTGGCCCTACCAATGCTGAAGAAAGCGATTTGTATGGAGATGCTTTTGTAACAAACAAACAGTCTGAAGATAGGCGTTTACCAAATGCCATTCTACCACTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCTTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAGGATTTAAATGACCTACAGGATATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATCGCTTAACTTGCCCTGCAAGGGGCTCAGCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTGGAATATCACAGACCAGATGAGACAATTCTACATCTTGCTGGTTCAACTGTTGACTTGAAATCTTGCAGTACGGGTCTGGAATTTGCAGAGGCACATAATTCTCTTTTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATGTGTGGTACCTTGAGGCTTGAAAATGTGTTGGCATTCTTTGCTGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCGGTTTTACCAAATGGCATGCTCGAGTTTCTAGATGCACCTGTCCCCTACATAGTTGGCATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGCCAACAGAAACCAGGTGAAGTCATCAACAGTACCTCAACTGCCAAGGCAGAAAGAGTTAATGTCTTCTTTACGGCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGACAGAAGCTGCTAAGGGTTTTTTATCGGTGTTAAGGTCTTATTTGGATTCTCTTTGCTATAACATTCGTTCTCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCGTTTCCTTATCGTGATCGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTTCATACAGATATTGTTCTCTCTTTCTTCCAAAAGGAATAG 2430 0.4136 MAGVTKEDESGSPSWGASFFTQTTEDVARAVAAAMNSPRPSVVYSSKNDHGGSQLQKLQYQVTKMIKGFSRPTEVKYTNYNPEILTTQKRQWAANFQLQYMDHKSWKEPTRLFESMVVVGLHPNCDIQALQRQYFLRKSEGPGKLRSALGYQNQSRVEAEPNLEPQVLFVYPPEKQMPLKDKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGFLSLISDKQATYSPLKRQRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTRIGGDLNLEYAEDSCEEENLEEKSECMLVNDRLEDRHDDNPMISQSSLRNSSPENIENDSNYPKKQMVNGDLHTFKERVNDDNAVPSDPETDRKTVREESGPTNAEESDLYGDAFVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLQDILEWAKANNCGPLQIISEYYRLTCPARGSALRFHPLEHLHPLEYHRPDETILHLAGSTVDLKSCSTGLEFAEAHNSLLAEEEATALSIWAVACMCGTLRLENVLAFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDANRNQVKSSTVPQLPRQKELMSSLRPYHETLVGESYLGRRRPVYECTEVQTEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDIVLSFFQKE* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1462 809 Gene3D - 579 745 IPR043153 -
Gso15g1462 809 Gene3D - 100 311 - -
Gso15g1462 809 MobiDBLite consensus disorder prediction 379 413 - -
Gso15g1462 809 ProSiteProfiles Tripartite DENN domain profile. 148 809 IPR037516 -
Gso15g1462 809 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 809 - -
Gso15g1462 809 MobiDBLite consensus disorder prediction 453 484 - -
Gso15g1462 809 SMART uDENN_cls 109 244 IPR005113 -
Gso15g1462 809 Pfam DENN (AEX-3) domain 578 681 IPR001194 -
Gso15g1462 809 MobiDBLite consensus disorder prediction 344 422 - -
Gso15g1462 809 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 809 - -
Gso15g1462 809 MobiDBLite consensus disorder prediction 352 376 - -
Gso15g1462 809 Pfam uDENN domain 165 242 IPR005113 -
Gso15g1462 809 SMART DENN_cls 275 683 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1462 Gso-Chr15 16804311 16818796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1462 - - gmx:100782148 1596.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1462 15 16804311 16818796 Gso9g0580 9 6854208 6868166 GST
Gso13g0795 13 22272373 22285695 Gso15g1462 15 16804311 16818796 PCT
Gso17g0417 17 3798921 3811991 Gso15g1462 15 16804311 16818796 PCT
Gso15g1462 15 16804311 16818796 Gso13g0795 13 22272373 22285695 PCT
Gso15g1462 15 16804311 16818796 Gso17g0417 17 3798921 3811991 PCT