Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0504 ATGGGAACGTTTCAGAGCTTCAGAAAAGCCTATGGAGCTCTCAAGGACTCAACCAAGGTTGGCCTCGCCAAAGTCAATAGTGAATACAAGGAGTTGGATATTGCAATTGTAAAGGCCACCAATCATGTGGAATATCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTATGCAACATCAGCACACCAGCCACGGGCAGATGTGGCATACTGTATTCACAAACTTTCTAAGAGACTTTCTAAGACTCAAAGTTGGATAGTTGCTATAAAGACATTGATAGTCATTCACAGGACTTTGAGAGAGGGTGATCCCACCTTTAGAGAAGAGATTCTTAACTACTCCCGCAGGGGACATATTCTCCATATATCCAATTTCAAAGATGATTCAAGCCCTCTAGCTTGGGATTGTTCTGCATGGGTTCGAGTCTATGCACTATTTTTAGAAGAAAGACTTGAATGTTTTAGAGTCCTTAAATATGACATAGAATCCGAGCGTTTAACAAAAGCATCACCAGCTGTAAATAAAGCACATAGCAGAACTCGATTGTTGGATAGTAATGATCTGTTGGAGCAGCTACCGGCACTACAACAACTTCTATATCGCCTTATTGGTTGTCAGCCTGAAGGATGTGCTTACCGTAATCATCTAGTACAATATGCGTTGGCCCTGGTTTTGAAAGAAAGTTTCAAAATATACTGCGCACTCAATGATGGAATCATCAATCTTGTTGACATGTTCTTTGATATGACAAGACATGACGCAGTGAAGGCTCTAAACATTTATAAAAGAGCTGGCCAACAGGCTGAGAATCTTGCTGACTTCTATGATTACTGCAAAGGCTTGGACCTTGCTAGGAATTTCCAATTTCCAACACTGAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCACCCCAGACAGGCCATGTTAATAAGAGACTGGAGTATCAAGAAAATGATGAATCGTCTAAAGAGGAATCAGAATCCAATGAATCTGCAGAGCCTCAAGCAAATGAGGAACAAGCTGAGGAAGTCAATGGGGAAGAGTCAGTAGAAGAGGAAGAAGAAAAACCTAAGCAGGAGGAGGAGGCAGAGTCTCCTCCTTTTATATCAACTGATGATGGTATAGATGATTTGCTGGGTCTTAATGAAATAAATCCAAAAGTTATGGAATTGGAGGAAAGCAATGCTATGGCTCTTGCAATTGTACCATCTGGAAATAATCCAAACAATCTTGCTTTGAGTAACATTGACGGGACTATTGGATGGGAACTTTCACTTGTTACTGCACCAAGTAACCATTCCAGTCAAGCCCCGGATCGCAGAATGGCTGGTGGTTTTGACAAGCTATTACTGGATAGTCTATATGAAGATGAAAATGCCAGGAGACAACTCCAACTCCAAAATGCAGGTTATGGACATGGTGGAACAATGGATATACATAACAACCCATTTGATCATTACAATCAGCATGATCCATTTGCAATGTCCAACAACATTGCACCTCCCCCCAGTGTGCAAATGGCATTAATGTCTCAACAACAACAGCAACAACAAATGGTGTTCCAACAGCAGCAAATGATGTACCAACAACCACAACAACACAACAACAACATGATGATGGTCCCTCACCAACAGCAACAACCATATAACCAATTCCCTCATCAGATGCAGAATTCAGGTTCTCATAATCCATTTGGAGATCCCTTACTGGTACCAAACTATAATCATAGTTCCATGCCCCAACGTGGAAATTACAATTTAATATAG 1788 0.4111 MGTFQSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLSKTQSWIVAIKTLIVIHRTLREGDPTFREEILNYSRRGHILHISNFKDDSSPLAWDCSAWVRVYALFLEERLECFRVLKYDIESERLTKASPAVNKAHSRTRLLDSNDLLEQLPALQQLLYRLIGCQPEGCAYRNHLVQYALALVLKESFKIYCALNDGIINLVDMFFDMTRHDAVKALNIYKRAGQQAENLADFYDYCKGLDLARNFQFPTLRQPPPSFLATMEEYIKEAPQTGHVNKRLEYQENDESSKEESESNESAEPQANEEQAEEVNGEESVEEEEEKPKQEEEAESPPFISTDDGIDDLLGLNEINPKVMELEESNAMALAIVPSGNNPNNLALSNIDGTIGWELSLVTAPSNHSSQAPDRRMAGGFDKLLLDSLYEDENARRQLQLQNAGYGHGGTMDIHNNPFDHYNQHDPFAMSNNIAPPPSVQMALMSQQQQQQQMVFQQQQMMYQQPQQHNNNMMMVPHQQQQPYNQFPHQMQNSGSHNPFGDPLLVPNYNHSSMPQRGNYNLI* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0504 595 Coils Coil 343 363 - -
Gso9g0504 595 MobiDBLite consensus disorder prediction 311 385 - -
Gso9g0504 595 MobiDBLite consensus disorder prediction 311 326 - -
Gso9g0504 595 Gene3D - 5 161 IPR008942 -
Gso9g0504 595 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Gso9g0504 595 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Gso9g0504 595 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 582 IPR045192 GO:0048268|GO:0072583
Gso9g0504 595 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 582 - -
Gso9g0504 595 SUPERFAMILY GAT-like domain 178 309 - -
Gso9g0504 595 SMART enth_2 30 161 IPR013809 -
Gso9g0504 595 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Gso9g0504 595 CDD ANTH_N 32 154 - -
Gso9g0504 595 MobiDBLite consensus disorder prediction 343 366 - -
Gso9g0504 595 Gene3D ANTH domain 174 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0504 Gso-Chr9 5430021 5436002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0504 K20044 - gmx:100783084 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1364 15 14464854 14470900 Gso9g0504 9 5430021 5436002 GST
Gso13g0723 13 21504635 21510094 Gso9g0504 9 5430021 5436002 PCT
Gso17g0498 17 4521396 4526671 Gso9g0504 9 5430021 5436002 PCT
Gso9g0504 9 5430021 5436002 Gso13g0723 13 21504635 21510094 PCT
Gso9g0504 9 5430021 5436002 Gso17g0498 17 4521396 4526671 PCT