Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0723 ATGGGAACGTTCCAGACCTTAAGAAAGGCCTACGGTGCTCTTAAAGACTCCACCACGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTTAAGGCTACGAGTCACGTAGAATATCCTCCTAAGGAACGTCATGTCAGAAAAATATTCTATGCAACTTCAGCACACCAGCCTCGGGCAGATGTAGCTTACTGCATACACACACTAGCCAAGAGGCTTTCAAAGACAAGGAATTGGATAGTTGCTATAAAGACATTGATAGTCATTCATAGAATATTGAGAGAGGGTGATCCTACTTTCAAAGATGACCTCATAAACTATGCGCGCAGGGGACGTTTTCTTCAAATATCTAATTTCAAAGATGACTCAAGTGCTCTAGCTTGGGACTGCTCTGCATGGGTTCGAACCTACGCACTATTTTTAGAAGAAAAGCTTGAATATTTTAGAATCCTAAGATGTGACATCGAAGCTGAGCGATTAACAAAACCATCACCGACTAAAACTCAGGGACATAGCAGAACACGGATGTTGACTAGTGAAGAGCTATTGGAGCAGCTACCTGCACTGCAGCAACTTCTATATCGCCTCATTGGTTGTGAGCCTGAAGGGTTGGCTTTCAGCAATTATCTAATCCAGTATGCACTGGCCTTGATATTGAAAGAGAGCTTCAAAATATATTGCGCCCTGAATGATGGAATCATAAATCTTGTGGATGTGTTCTTTGATATGCCAAAATATGATGCAGTGAAGGCGTTACATATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGACTTCTATGAATACTGCAAGAGATTGGACCTTGCTCGGAATTTTCAATTTCCAACCTTGAGACAGCCACCTGCTTCTTTTCTTGCCACGATGGAAGAATACATTAGAGAAGCACCCCTGACTGCTACTAAGAGACTAGAGTATCACGAAAATGATCAATCACCTCAAAGAGAAGAAGCAAAACACAGAGAAGCTGAAGCAAGTGAGCAACCAGATGAAGAAGTTAACGAGGAAGAACCGGTAGATAAGGACGAAACACAGCCTAAGGAAGAGGAAGCTGAACTTCCTCCTTTGATATCAACTGATGATACTGACGATTTGCTGGGTCTAAACGAGATAAATCCAAAAGCTCAAGAACTAGAAGAAAACAATGCTTTGGCGCTTGCAATTGTACCACCCGGTGGACATAACTCGAGCAATCTTGCTTTGACTAACATAAGCGGAACTTCTGGTTGGGAACTTGCACTGGTTACAACACCAAGTAGCCATACAAGCCAAGCACCAGATCGCAAAATGGCAGGTGGGTTTGACAAGCTATTACTAGACAGTTTGTATGAAGATGAAAATGCCAGGAGACAACTTCAACTCCGAAATGCAGGCTATGGATATGAGGGAATGGTTACACATAATCCATTCGATCATTATAATCAGCAGGATCCATTTGCAATGTCCAACATAGCACCTCCAGCCAATGTGCAAATGGCATTCATGGCTCAGCAACAACAACAAATGATGTTCCAACAACAGCAACAATATAACACGATGATGGTCCCTTACCAGTATCCACAGACTCAATACAATCAACAAATGCCAGTTATTGGTTCTTCTAATCCATTTAATGATGCCTTACCCATGCCTAGCTATCCTCATAGTTCCATGCATCATCAAGGAAACTACCACTTAATGTAG 1725 0.4209 MGTFQTLRKAYGALKDSTTVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLAKRLSKTRNWIVAIKTLIVIHRILREGDPTFKDDLINYARRGRFLQISNFKDDSSALAWDCSAWVRTYALFLEEKLEYFRILRCDIEAERLTKPSPTKTQGHSRTRMLTSEELLEQLPALQQLLYRLIGCEPEGLAFSNYLIQYALALILKESFKIYCALNDGIINLVDVFFDMPKYDAVKALHIYKRAGQQAENLADFYEYCKRLDLARNFQFPTLRQPPASFLATMEEYIREAPLTATKRLEYHENDQSPQREEAKHREAEASEQPDEEVNEEEPVDKDETQPKEEEAELPPLISTDDTDDLLGLNEINPKAQELEENNALALAIVPPGGHNSSNLALTNISGTSGWELALVTTPSSHTSQAPDRKMAGGFDKLLLDSLYEDENARRQLQLRNAGYGYEGMVTHNPFDHYNQQDPFAMSNIAPPANVQMAFMAQQQQQMMFQQQQQYNTMMVPYQYPQTQYNQQMPVIGSSNPFNDALPMPSYPHSSMHHQGNYHLM* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0723 574 MobiDBLite consensus disorder prediction 321 381 - -
Gso13g0723 574 MobiDBLite consensus disorder prediction 354 368 - -
Gso13g0723 574 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 561 - -
Gso13g0723 574 MobiDBLite consensus disorder prediction 321 341 - -
Gso13g0723 574 Gene3D ANTH domain 172 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gso13g0723 574 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 561 IPR045192 GO:0048268|GO:0072583
Gso13g0723 574 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Gso13g0723 574 Gene3D - 5 161 IPR008942 -
Gso13g0723 574 SMART enth_2 30 161 IPR013809 -
Gso13g0723 574 SUPERFAMILY GAT-like domain 178 309 - -
Gso13g0723 574 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Gso13g0723 574 CDD ANTH_N 32 154 - -
Gso13g0723 574 Pfam ANTH domain 31 309 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0723 Gso-Chr13 21504635 21510094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0723 K20044 - gmx:100815975 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0723 13 21504635 21510094 Gso17g0498 17 4521396 4526671 GST
Gso13g0723 13 21504635 21510094 Gso15g1364 15 14464854 14470900 PCT
Gso13g0723 13 21504635 21510094 Gso9g0504 9 5430021 5436002 PCT
Gso15g1364 15 14464854 14470900 Gso13g0723 13 21504635 21510094 PCT
Gso9g0504 9 5430021 5436002 Gso13g0723 13 21504635 21510094 PCT