Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1364 ATGGGAACGTTTCAGAGCTTTAGAAAAGCCTATGGAGCTCTCAAGGACTCTACCAAGGTTGGCCTTGCCAAAGTCAATAGCGAATACAAGGAGTTGGATATTGCAATTGTAAAAGCTACCAATCATGTGGAATATCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTGTGCAACATTAGCACACCAGCCACGGGCAGATGTGGCATACTGCATTCACAAACTTGCTAAGAGACTTTCAAAGACGCGAAGTTGGATAGTTGCTATAAAGACATTGATAGTCATTCATAGGACTTTGAGAGAGGGTGATCCTACCTTTAGAGAAGAGATTCTTAACTACTCACGTAGGGGACATATTCTCCAAATATCCAATTTCAAAGATGATTCAAGCCCTTTAGCTTGGGATTGTTCTGCATGGGTGCGAACTTATGCACTATTTTTAGAAGAAAGACTTGAATGCTTTAGAGTCCTTAAATATGACATAGAATCCGAGCGTTTAACAAAAGCATCACCAGTGGTTAATAATGTACATAGCAAAACTCGGTCGTTGGATAGTGATGATCTATTGGAGCAGCTACCTGCACTACAACAACTTCTATATCGCCTTATTGGTTGTCAACCTGAAGGATGTGCTTACAGCAATCATCTAGTACAATATGCGTTGGCCCTGGTTTTGAAAGAGAGTTTCAAAATATACTGCACACTCAATGACGGAATCATCAATCTTGTGGACGTGTTCTTTGATATGACAAGACATGACGCAGTGAAAGCTCTAAACATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGACTTCTATGAATACTGCAAAGGCTTGGACCTTACTAGGAATTTCCAATTTCCAACACTGAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCACCACAGACAGGCTATGTTAATAAGAAAGTGGAGTATCAGGAAAATGAAGAATCATCTAAAGAAGAATCAGAATCCAATGAATCTGCAGAGCCTCAAGCAAATGAAGAACAAGTTGAAGAAGTCAATGAGGAAGAGTCAGTGGAAGAGGAAGAAGAACAACCTAAGGAGGAGGAGGTAGAGCCTCCTCCTTTGATATCAACTGATGATGGTACAAATGATTTGCTGGGTCTTAATGAAATAAATCCAAAAGCTATGGAACTGGAGGAAAGCAATGCCATGGCTCTTGCAATTGTACCACCTGGAAATAATCCAAACAATCTTGCTTTGAGTAACTTTGATGGGACTACTGGATGGGAACTTTCACTAGTTACAACATCAAGTAACCATTCCAGTCAAGCCCCAGATCGCAGATTGGCTGGTGGTTTTGACAAACTATTACTGGATAGTCTATATGAAGATGAAAATGCCAGGAGACAACTCCAACTCCAAAATGCAGGTTATGGACATAGTGGAACAATGGATATACAGAACAACAACCCATTTGATCATTACAACCAACAGGATCCCTTTGCAATGTCCAACAACATAGCACCTCCCCCTAGTGTGCAAATGGCACTAATGTCTCAACAACAGCAGCAACAACAAATGATGTTCCAACAGCAGCAAATGATGTACCAACAAGCACAACAACAGCACAACAACATGATGATGGTCCCTTACCACCAGCAACAACCATATAACCAATACCCTCAACAGATGTATAATTCAAGTTCTCATAATCCATTTGGAGATCCTTTACCGGTACCAAACTATAATCATAGTTCCATGCCCCAACAGGGAAATTACAATTTAATGTAA 1788 0.4049 MGTFQSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFCATLAHQPRADVAYCIHKLAKRLSKTRSWIVAIKTLIVIHRTLREGDPTFREEILNYSRRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERLTKASPVVNNVHSKTRSLDSDDLLEQLPALQQLLYRLIGCQPEGCAYSNHLVQYALALVLKESFKIYCTLNDGIINLVDVFFDMTRHDAVKALNIYKRAGQQAENLADFYEYCKGLDLTRNFQFPTLRQPPPSFLATMEEYIKEAPQTGYVNKKVEYQENEESSKEESESNESAEPQANEEQVEEVNEEESVEEEEEQPKEEEVEPPPLISTDDGTNDLLGLNEINPKAMELEESNAMALAIVPPGNNPNNLALSNFDGTTGWELSLVTTSSNHSSQAPDRRLAGGFDKLLLDSLYEDENARRQLQLQNAGYGHSGTMDIQNNNPFDHYNQQDPFAMSNNIAPPPSVQMALMSQQQQQQQMMFQQQQMMYQQAQQQHNNMMMVPYHQQQPYNQYPQQMYNSSSHNPFGDPLPVPNYNHSSMPQQGNYNLM* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1364 595 Gene3D - 5 161 IPR008942 -
Gso15g1364 595 Gene3D ANTH domain 172 327 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gso15g1364 595 Coils Coil 343 363 - -
Gso15g1364 595 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Gso15g1364 595 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Gso15g1364 595 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 582 - -
Gso15g1364 595 SUPERFAMILY GAT-like domain 178 309 - -
Gso15g1364 595 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Gso15g1364 595 MobiDBLite consensus disorder prediction 581 595 - -
Gso15g1364 595 MobiDBLite consensus disorder prediction 343 367 - -
Gso15g1364 595 MobiDBLite consensus disorder prediction 322 384 - -
Gso15g1364 595 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 582 IPR045192 GO:0048268|GO:0072583
Gso15g1364 595 MobiDBLite consensus disorder prediction 565 595 - -
Gso15g1364 595 CDD ANTH_N 32 154 - -
Gso15g1364 595 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1364 Gso-Chr15 14464854 14470900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1364 K20044 - gmx:100786060 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1364 15 14464854 14470900 Gso9g0504 9 5430021 5436002 GST
Gso13g0723 13 21504635 21510094 Gso15g1364 15 14464854 14470900 PCT
Gso17g0498 17 4521396 4526671 Gso15g1364 15 14464854 14470900 PCT
Gso15g1364 15 14464854 14470900 Gso13g0723 13 21504635 21510094 PCT
Gso15g1364 15 14464854 14470900 Gso17g0498 17 4521396 4526671 PCT