Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0498 ATGGGAACGTTCCAGACCTTAAGAAAGGCCTACGGTGTTCTCAAAGACTCCACCACGGTTGGCCTAGCCAAGGTCAATAGCGAATATAAGGAATTGGATATTGCAATTGTGAAGGCTACGAGTCACGTAGAATATCCTCCTAAGGAACGTCATGTTAGAAAAATATTCTATGCAACTTCAGCACACCAGCCGCGGGCAGATGTAGCTTACTGCATACACACACTAGCCAAGCGGCTTTCGAAGACACGGAATTGGATAGTTGCCATAAAGACATTGATAGTCATTCATAGAATATTGAGAGAGGGTGATCCTACTTTCAAAGATGACCTCACAGCCTACGTGCGCAGGGGACGTTTTCTTCAAATATCTAATTTCAAAGATGACTCAAGTGCTCTAGCTTGGGACTGTTCTGCATGGGTTCGAACCTACGCACTATTTTTAGAAGAAAGGCTTGAATGTTTTAGAATCCTAAGATATGACATCGAAGCTGAGCGTTTAACAAAACCATCACCGACTATAACTCAAGGACATAGCAGAACACGAATGTTGACTAGTGAAGGGCTATTGGAGCAGCTGCCTGCACTGCAGCAACTTCTATATCGCCTAATTGGTTGTGAGCCTGAAGGGTTGGCTTTACGCAATCATCTAATACAGTATGCACTGGCCTTGATATTGAAAGAGAGCTTCAAAATATATTGCGCCCTCAATGATGGAATCATAAATCTTGTGGATGTGTTCTTTGATATGCCAAAATATGATGCAGTGAAGGCGTTACGTATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGACTTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAACCTTGAGACTGCCACCTGCTTCTTTTCTTGCGACGATGGAAGAATACATTAAAGAAGCACCCCTGACTGCTACTAAGAGACTGGAGTATCACGAAAATGATCAATCACCTCAAAGTGAAGCAGAACCCAAAGAATCTGAAGAAGCTGAAGCAAGTGAGCAACCAGATGAAGAAGTCAACGAGGAAGAACTGGTAGATAAAGATGAAACACAACCTAAGGAAGAGGAAGCTGAACTTCCTCCTTTGATATCAACTGATGATTTGCTGGGTCTAAACGAGATAAATCCAAAAGCTCAAGAACTAGAAGAAAGCAATGCTTTGGCGCTTGCAATTGTACCACCCGGCGGACATTACTCAAACAATCTTGCGTTGACTAACATAAGCGGAACTTCTGGTTGGGAACTTGCACTGGTAACAACACCAAGTAACCATACAAGCCAAGCACCAGATCGCAGAATGGCTGGTGGGTTTGATAAGCTATTACTAGACAGTTTGTATGAAGATGAAAATGCCAGGAGACAACTTCAACTACGAAATGCAGGCTATGGATATGAGGGAATGGATACACATAATCCATTTGATCATTATAATCAGCAGGATCCATTTGCAATGTCCAACAACATAGCGCCTCCGGCCAATGTGCAAATGGCATTCATGGCTCAGCAACAACAACAAATGATGTTCCAACAACAGCAACAATATAACACGATGATGGTCCCTTACCAGTATCCACAGACTCAATACAATCAACAAATGCCAGTAATGGGTTCTGCTAATCCATTTAGTGATCCCTTATCCGTGCCTAGCTATACTTATAGTTCCATGCATCATCAAGGAAACTACCACTTAATGTAG 1725 0.4232 MGTFQTLRKAYGVLKDSTTVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLAKRLSKTRNWIVAIKTLIVIHRILREGDPTFKDDLTAYVRRGRFLQISNFKDDSSALAWDCSAWVRTYALFLEERLECFRILRYDIEAERLTKPSPTITQGHSRTRMLTSEGLLEQLPALQQLLYRLIGCEPEGLALRNHLIQYALALILKESFKIYCALNDGIINLVDVFFDMPKYDAVKALRIYKRAGQQAENLADFYEYCKRLDLARNFQFPTLRLPPASFLATMEEYIKEAPLTATKRLEYHENDQSPQSEAEPKESEEAEASEQPDEEVNEEELVDKDETQPKEEEAELPPLISTDDLLGLNEINPKAQELEESNALALAIVPPGGHYSNNLALTNISGTSGWELALVTTPSNHTSQAPDRRMAGGFDKLLLDSLYEDENARRQLQLRNAGYGYEGMDTHNPFDHYNQQDPFAMSNNIAPPANVQMAFMAQQQQQMMFQQQQQYNTMMVPYQYPQTQYNQQMPVMGSANPFSDPLSVPSYTYSSMHHQGNYHLM* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0498 574 Gene3D ANTH domain 174 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gso17g0498 574 SMART enth_2 30 161 IPR013809 -
Gso17g0498 574 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Gso17g0498 574 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 561 IPR045192 GO:0048268|GO:0072583
Gso17g0498 574 SUPERFAMILY GAT-like domain 178 309 - -
Gso17g0498 574 MobiDBLite consensus disorder prediction 321 378 - -
Gso17g0498 574 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Gso17g0498 574 Gene3D - 6 161 IPR008942 -
Gso17g0498 574 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 561 - -
Gso17g0498 574 MobiDBLite consensus disorder prediction 356 370 - -
Gso17g0498 574 MobiDBLite consensus disorder prediction 336 355 - -
Gso17g0498 574 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Gso17g0498 574 MobiDBLite consensus disorder prediction 321 335 - -
Gso17g0498 574 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0498 Gso-Chr17 4521396 4526671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0498 K20044 - gmx:100818165 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0498 17 4521396 4526671 Gso17g0498 17 4521396 4526671 ECH
Gso13g0723 13 21504635 21510094 Gso17g0498 17 4521396 4526671 GST
Gso17g0498 17 4521396 4526671 Gso15g1364 15 14464854 14470900 PCT
Gso17g0498 17 4521396 4526671 Gso9g0504 9 5430021 5436002 PCT
Gso15g1364 15 14464854 14470900 Gso17g0498 17 4521396 4526671 PCT
Gso9g0504 9 5430021 5436002 Gso17g0498 17 4521396 4526671 PCT