Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0501 ATGCCTCCGGCGCTGTCGGATCCGCTGTCGGTGACTCCGGCAAGCTCCGACGCTGTTCTGCAGCGATCGGCGCCGCCGGAGAATCGGCGATTCGGTGATCTTAGAGGGTTGCAGTGGCGGATAAATCTTGGGGTGCTGCCGTCTTCGTCTTCGACTTCAATTGATGATCTTCGTCGAGTCACCGCGAATTGTAGAAGAAGGTATGCTAGCTTGAGAAGGCGCCTTCTGGTTGAACCACATGTTCCAAAGGATGGAGCTAATTCACGCAATCTTGTCATTGACAATCCACTTTCACAGAATCCAGATAGTACATGGGGTCGCTTTTTCCGCAATGCAGAGTTGGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGTTATTTTCAGACTCCAGGATGCCAAAGCATGTTGAGACGAATTTTATTACTGTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATTTGGAGCATCTTTCGGAAGTTCGGAAGCTTTACGAAGATCACTTTACAGACAGATTTGACGGCCTTTTATATCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTCCAGAATTGATGGAGGATGAATTTGGTTCTCATGGAAATGCTGTGAAAGTCAATAGTCTTGAGGAACTTGATCCTGAGATACAGACCATTGTATTACTAAGTGATGCTTATGGAGCTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTCGTGGAGCATGACGCATACTGTATGTTTGATGCTTTGATGAGTGGGGCCCATGGTTCAGTTGCAATGGCCGATTTCTTCTCTTCATCCCCTGTATCTGGGTCCCATAGTGGCGTGCCTCCTGTGATTGAGGCTTCGGCTGCATTGTATTATTTGTTGTCTCTTGTAGATTCATCTCTCCACAGCCATCTTTTTGAACTTGGGGTTGAACCTCAGTACTTTTCTCTTCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGCCAACCTCTTGATCATATGGGATGAGATCTTTGCATCAGAGAATAGCAGCTTGGAAAAAGGTGCTGATGACTGTGAGTTCAGGATCTTAAGTTCACCTCGTGGAGCATTTATCTCAGCTATGGCAGTAGCTATGTTACTTCATTTAAGATCTTCACTACTTGCAACTGAAAACCCTACAAGGTGTCTTCAGAGATTACTAAACTTTCCTGAAGACATTAATATTGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGCTTTGGCACTGAGTGTTGATATTTCATCATCGTCACTTTTGTTTCTTGGATTTCATTACCAAAGTAAATCTATATATACTACATCTGTGACCCTTCCATCTGAATCCGTGTCTCCGAAAACTCCACTGAATTTGTTACCCGATAGCTATTGGGAAGAGAAGTGGAGGGTTGCCCACAAGGCTGAAGAACTTAGGCAAGATAGTCTAGAAAAGCAGGTTCCCACTCGGAAAAAGGGATGGACGGAAAAGGTAAAATTCAGTTTGAGACGAGCAAAATCTGACCCTCCTTTGTCAAGGATTCAGAGTGGCAAACATTTTAGGCGCAGTTTGTTGGAAGATCTTCGCAAGGCACTCGGCTCAGAGGAAGATGCAGAGAAAATGCAGCCAGATGAAACACTACGGCAGCATGATAATCCTTCTGAAGCAGTTGAAGTACAACAAGAAGATAGTGTCTGTAGTGGTGACAGCAATTACTTGTCTGATGATAGATCTCCAAGTGGAAATTCTGGCAGTGAGGAAGACTTGTCTATATATTCTGACCCGACTAGTCCCCAGAATGAGGTCAATGATCATGAAATTACCTCAGCGAAAAGTAGTGTTACATCTAATTCATCCCTAGACGAATGCAATGAAACTTCAGGTACCAGTTCACCATTTCCAATCTCCGATCCTCCTGAGAACATTTCTCAGACATCACAGTGCAATACAGAAAATTATGAATGCAGTGAAACATCACATACCAGTCCCAATGATCCACACCTTCTAATCTCCGATCTTCCCGAGAACATTTCTCAGACATCACAGTGCAATACAGAAAATTCTGAATGCAATGAAACTTCACATACCAGTCCCAATGATCCACCCCTTCTAATCTCCAATCCTCCCAAGAACATTTCTCAGACATCACAGTGCAATACAGAAAATTCTGAATGCAATGAAACTTCAGTTATCTGTCCCAATGATCCACTCCTTCCAATCTCTGATCCTCCAAAGAACAAACCTCCGACATCAGGGTGCAATAGCTTTGAGGAAGCAGGAAATACAGTCAATCCTCCTAAAGACAAAAAACAGAATAAGTTGCAGTGGTTTTGGCCGTTTGGACGGAATAATGTTGAAGTGATCTCCGAGAAAGCAGCAGGTGCTGCTGAAGCCGCCAACCGGGGTAGCATTCAAAAAAATACTCCACAACCAGCCTCATCTGCAGTTAATGAGCCTTGTAGTTCTGTTAGTTGCAGTGGAGAATCTGTTGACAAGAATGTGATGGGCACTTTGAAGAATATTGGACAGTCTATGCTTGACCATATTCAGATAATTGAATCTGTTTTCCAACAAGACCGCAAAGGCCAAGTTACTGCCATGACTGCTCTCAAAGAGCTTAGGAAAATTAGCAATCTTTTGTCTGAGATGTGA 2727 0.4312 MPPALSDPLSVTPASSDAVLQRSAPPENRRFGDLRGLQWRINLGVLPSSSSTSIDDLRRVTANCRRRYASLRRRLLVEPHVPKDGANSRNLVIDNPLSQNPDSTWGRFFRNAELERMVDQDLSRLYPEHGSYFQTPGCQSMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDLEHLSEVRKLYEDHFTDRFDGLLYQENDLSYSFDFKKSPELMEDEFGSHGNAVKVNSLEELDPEIQTIVLLSDAYGAEGELGIVLSEKFVEHDAYCMFDALMSGAHGSVAMADFFSSSPVSGSHSGVPPVIEASAALYYLLSLVDSSLHSHLFELGVEPQYFSLRWLRVLFGREFSLANLLIIWDEIFASENSSLEKGADDCEFRILSSPRGAFISAMAVAMLLHLRSSLLATENPTRCLQRLLNFPEDINIEKLLEKAKSLQALALSVDISSSSLLFLGFHYQSKSIYTTSVTLPSESVSPKTPLNLLPDSYWEEKWRVAHKAEELRQDSLEKQVPTRKKGWTEKVKFSLRRAKSDPPLSRIQSGKHFRRSLLEDLRKALGSEEDAEKMQPDETLRQHDNPSEAVEVQQEDSVCSGDSNYLSDDRSPSGNSGSEEDLSIYSDPTSPQNEVNDHEITSAKSSVTSNSSLDECNETSGTSSPFPISDPPENISQTSQCNTENYECSETSHTSPNDPHLLISDLPENISQTSQCNTENSECNETSHTSPNDPPLLISNPPKNISQTSQCNTENSECNETSVICPNDPLLPISDPPKNKPPTSGCNSFEEAGNTVNPPKDKKQNKLQWFWPFGRNNVEVISEKAAGAAEAANRGSIQKNTPQPASSAVNEPCSSVSCSGESVDKNVMGTLKNIGQSMLDHIQIIESVFQQDRKGQVTAMTALKELRKISNLLSEM* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0501 908 MobiDBLite consensus disorder prediction 559 745 - -
Gso9g0501 908 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 102 284 - -
Gso9g0501 908 Gene3D - 306 445 - -
Gso9g0501 908 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 763 843 - -
Gso9g0501 908 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 18 558 - -
Gso9g0501 908 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 33 327 IPR035969 -
Gso9g0501 908 MobiDBLite consensus disorder prediction 824 845 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 559 582 - -
Gso9g0501 908 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 304 439 IPR035969 -
Gso9g0501 908 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 18 558 - -
Gso9g0501 908 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 763 843 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 698 745 - -
Gso9g0501 908 SMART tbc_4 26 410 IPR000195 -
Gso9g0501 908 Pfam Rab-GTPase-TBC domain 115 174 IPR000195 -
Gso9g0501 908 Pfam Rab-GTPase-TBC domain 266 368 IPR000195 -
Gso9g0501 908 ProSiteProfiles TBC/rab GAP domain profile. 29 367 IPR000195 -
Gso9g0501 908 MobiDBLite consensus disorder prediction 772 794 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 583 691 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 826 845 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 1 27 - -
Gso9g0501 908 MobiDBLite consensus disorder prediction 761 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0501 Gso-Chr9 5402183 5407967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0501 K18469 - gmx:100782008 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1360 15 14411371 14417123 Gso9g0501 9 5402183 5407967 GST
Gso13g0721 13 21495811 21501173 Gso9g0501 9 5402183 5407967 PCT
Gso17g0499 17 4530267 4535622 Gso9g0501 9 5402183 5407967 PCT
Gso9g0501 9 5402183 5407967 Gso13g0721 13 21495811 21501173 PCT
Gso9g0501 9 5402183 5407967 Gso17g0499 17 4530267 4535622 PCT