Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0276 ATGGTAGCACCTTTCCCAATTTCCACTCGAAGCGAAAAGATTTTACCCATTGACCTTCCCGTGGTAGACCTAACCGCGGAAAGATCAATGGTGACAAAACTCATTGTGAAGGCGTGTGAGGAATATGGTTTCTTCAACGTGATTAACCATGGCATTCCTCGTGACACCATAGCTGAAATGGAAGAAACAGCTTTTGATTTCTTTGCCAAACCAATGGCTCAAAAGAAACAACTTGCCCTCTATGGCTGCAAGAACATAGGCTTCAATGGAGACATGGGAGAGGTCGAGTACCTTCTCCTCAGTGCTACTCCTCCCTCTATTTCTCACTTCAAAAACATCTCCAATATGCCATCAAAATTCAGCTCTAGTGTGAGTGCATACACAGAGGGTGTGAGGGAGCTGGCATGTGAGATTTTGGAGCTAATGGCAGAGGGTCTGGGGGTCCCGGATACATGGTTTTTCAGCAGGTTGATCAGGGAGGTTGATAGTGACTCAGTCCTTAGGTTCAATCACTACCCACCTATTATACTTAACAACAAAGATTGCAAGGACAACCACAACCACACCAAGGTAATTGGCTTTGGGGAGCATTCTGACCCTCAGATTCTTACCATCCTCAGATCCAACGACGTGGGTGGCCTCCAAATCTCTCTTCAAGATGGTGTGTGGAACCCAGTTGCCCCTGACCCCTCAGCTTTCTGTGTTAATGTGGGTGATCTCTTACAGGTTATGACAAATGGGAGATTTGTGAGCGTGAGACACAGGGCCATGACCAACTCACACAAGTCTAGAATGTCGGTTGCATATTTTGGTGGTCCACCACTTGATGCATGCATTGTTGCTCCCCCAGTTATGGTTACACCCGAGAGGCCCTCTCTTCTCTTCAAGCCATTTACTTGGGCTGAATACAAGAAAGTCACCTATTCTATGAGGCTTGGAGAACACCGCATTGACCTTTTCAGGAGCAACTAG 972 0.4671 MVAPFPISTRSEKILPIDLPVVDLTAERSMVTKLIVKACEEYGFFNVINHGIPRDTIAEMEETAFDFFAKPMAQKKQLALYGCKNIGFNGDMGEVEYLLLSATPPSISHFKNISNMPSKFSSSVSAYTEGVRELACEILELMAEGLGVPDTWFFSRLIREVDSDSVLRFNHYPPIILNNKDCKDNHNHTKVIGFGEHSDPQILTILRSNDVGGLQISLQDGVWNPVAPDPSAFCVNVGDLLQVMTNGRFVSVRHRAMTNSHKSRMSVAYFGGPPLDACIVAPPVMVTPERPSLLFKPFTWAEYKKVTYSMRLGEHRIDLFRSN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0276 323 Pfam 2OG-Fe(II) oxygenase superfamily 165 271 IPR044861 -
Gso9g0276 323 PANTHER PLANT GIBBERELLIN 2-OXIDASE 5 321 - -
Gso9g0276 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 79 IPR026992 -
Gso9g0276 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 273 IPR005123 -
Gso9g0276 323 SUPERFAMILY Clavaminate synthase-like 16 313 - -
Gso9g0276 323 Gene3D - 6 311 IPR027443 -
Gso9g0276 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0276 Gso-Chr9 2666106 2673551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0276 17 270 Glycosyltransferase AT5G59530 30.182 3.18e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0276 K04125 - gmx:100811043 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1150 15 11196922 11217099 Gso9g0276 9 2666106 2673551 GST
Gso7g1995 7 44002505 44007359 Gso9g0276 9 2666106 2673551 PCT
Gso17g0308 17 2728231 2733392 Gso9g0276 9 2666106 2673551 PCT
Gso9g0276 9 2666106 2673551 Gso7g1995 7 44002505 44007359 PCT
Gso9g0276 9 2666106 2673551 Gso17g0308 17 2728231 2733392 PCT