Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0308 ATGGTGTTGGCTTCCCCAAACTCAATAAGGAGCGAAGGGATTCTACCCAGCAACGAGCTTATTCCCGTTGTGGACCTAACAGCAGAAAGGTCACAAGTGACAAAGCTCATAGTGAAAGCGTGCGAAGAGTACGGTTTCTTCAAGGTGATAAACCACGGTATAAGCCACGAAGTGATATCAAAAACTGAAGAAGCAGGGTTTAGTTTCTTTACAAAACCGGTGGCAGAGAAGAAAGTGGCAGCACCTGCATATGGGTGCAAGAACATAGGGTTGAATGGGGACATGGGTGAGGTGGAGTACCTTCTCCTCAGTGCCACCACTCACTCCATTTCTCAGATATCCAAAACTATATCCACTGACCCATTAAACGTCAGCTCTACATTGAGTGCATACACAGAAGCAGTGAGGGAGCTCGCATGTGAGATATTGGAGCTAATAGCAGAGGGGTTGGGGGTCCCGGACACTTGGATATTCAGCAGGTTCATAAGGGATGTTGACAGTGACTCAGTTCTAAGGCTCAATCACTACCCACCTATAATTAACAAGGACAACAACAAAGACATGTCACAAAAATTTACCAAGGTTGGCTTTGGAGAGCATTCTGATCCTCAGATCATAACCATTCTCAGATCCAACGAAGTGGGTGGCCTCCAAATTTCCCTTCAAGATGGGGTCTGGATCCCAGTCACCCCTGACCCCTCAGCATTCTATGTGAACGTGGGTGATGTACTAGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACACAGGGCTATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCCCTCCATGCTACCATTGTTGCTCCCTCAGTTATGGTCACACCTCAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCCGAATACAAGAAAGCAACTTACTCTCTCAGGCTTGGAGACACACGCATTCAACTTTTCACAAATAAACTAAACCACTCATGA 990 0.4657 MVLASPNSIRSEGILPSNELIPVVDLTAERSQVTKLIVKACEEYGFFKVINHGISHEVISKTEEAGFSFFTKPVAEKKVAAPAYGCKNIGLNGDMGEVEYLLLSATTHSISQISKTISTDPLNVSSTLSAYTEAVRELACEILELIAEGLGVPDTWIFSRFIRDVDSDSVLRLNHYPPIINKDNNKDMSQKFTKVGFGEHSDPQIITILRSNEVGGLQISLQDGVWIPVTPDPSAFYVNVGDVLEVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRIQLFTNKLNHS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0308 329 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 324 - -
Gso17g0308 329 SUPERFAMILY Clavaminate synthase-like 20 316 - -
Gso17g0308 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 276 IPR005123 -
Gso17g0308 329 Pfam 2OG-Fe(II) oxygenase superfamily 168 274 IPR044861 -
Gso17g0308 329 Gene3D - 5 313 IPR027443 -
Gso17g0308 329 PRINTS Isopenicillin N synthase signature 37 54 - -
Gso17g0308 329 PRINTS Isopenicillin N synthase signature 200 221 - -
Gso17g0308 329 PRINTS Isopenicillin N synthase signature 236 262 - -
Gso17g0308 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 80 IPR026992 -
Gso17g0308 329 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0308 Gso-Chr17 2728231 2733392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0308 21 317 Glycosyltransferase AT5G59530 28.707 6.45e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0308 K04125 - gmx:100816206 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0308 17 2728231 2733392 Gso17g0308 17 2728231 2733392 ECH
Gso7g1995 7 44002505 44007359 Gso17g0308 17 2728231 2733392 GST
Gso17g0308 17 2728231 2733392 Gso15g1150 15 11196922 11217099 PCT
Gso17g0308 17 2728231 2733392 Gso9g0276 9 2666106 2673551 PCT
Gso15g1150 15 11196922 11217099 Gso17g0308 17 2728231 2733392 PCT
Gso9g0276 9 2666106 2673551 Gso17g0308 17 2728231 2733392 PCT