Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1995 ATGGTGTTGGCTTCCCCAAACCCAATAAGGAGCGAAGGGATTCTACCCAGTAACGAGCTTATTCCCGTTGTGGACCTCACAGCAGAAAGGTCAGAAGTGGCAAAGCTCATAGTGAAAGCGTGCGAAGAGTACGGTTTCTTCAAGGTGATAAACCACGGTATAAGCCACGAAGTGATATCAAAAACCGAAGAAGCAGGGTTTAGTTTCTTCGAAAAACCGGTGGCAGAGAAGAGAGTGGCAGCACCTGCATATGGGTGCAAGAACATAGGGTTGAATGGGGACATGGGTGAGGTGGAGTACCTTGTCCTCGGTGCCACCACTCACTCCATTGCTCAGATATCCAAAACTGTATCCACTGACCCATTAAACTTCAGCTCTACATTGAGTGCATACACAGAAGCAGTGAGGGAGCTGGCATGTGAGATATTGGAACTAATAGCAGAGGGCTTGGGGGTCCCGGACACTAGGGCATTCAGCAGGTTCATAAGGGATGTTGATAGTGACTCAGTTCTCAGGCTCAATCACTACCCACCTATAATTAACAAGGACAAGGACATGTCACAATATAGCAAGGTTGGTTTTGGAGAGCATTCTGACCCTCAGATCATAACCATTCTCAGATCCAACGACGTGGGTGGCCTCCAAATTTCCCTTCAAGATGGGGTGTGGATCCCAGTTACCCCTGACCCCTCAGCATTCTATGTGAACGTGGGTGATGTACTAGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACACAGGGCTATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCCCTCCATGCTACCATTGTTGCTCCCTCAGTTATGGTCACACCCCAGAGGCCCTCTCTCTTTCGACCATTCACTTGGGCCGACTACAAGAAAGCCACCTACTCTCTCAGGCTTGGAGACACACGCATTCAGCTTTTCACAAATAGACTAACCACTAATCACCACCCAAAAGTCTAG 996 0.4819 MVLASPNPIRSEGILPSNELIPVVDLTAERSEVAKLIVKACEEYGFFKVINHGISHEVISKTEEAGFSFFEKPVAEKRVAAPAYGCKNIGLNGDMGEVEYLVLGATTHSIAQISKTVSTDPLNFSSTLSAYTEAVRELACEILELIAEGLGVPDTRAFSRFIRDVDSDSVLRLNHYPPIINKDKDMSQYSKVGFGEHSDPQIITILRSNDVGGLQISLQDGVWIPVTPDPSAFYVNVGDVLEVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWADYKKATYSLRLGDTRIQLFTNRLTTNHHPKV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1995 331 SUPERFAMILY Clavaminate synthase-like 20 313 - -
Gso7g1995 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 80 IPR026992 -
Gso7g1995 331 Pfam 2OG-Fe(II) oxygenase superfamily 168 271 IPR044861 -
Gso7g1995 331 Gene3D - 7 310 IPR027443 -
Gso7g1995 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 321 - -
Gso7g1995 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 273 IPR005123 -
Gso7g1995 331 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1995 Gso-Chr7 44002505 44007359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1995 21 314 Glycosyltransferase AT5G59530 28.076 5.60e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1995 K04125 - gmx:100783917 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1995 7 44002505 44007359 Gso17g0308 17 2728231 2733392 GST
Gso7g1995 7 44002505 44007359 Gso15g1150 15 11196922 11217099 PCT
Gso7g1995 7 44002505 44007359 Gso9g0276 9 2666106 2673551 PCT
Gso15g1150 15 11196922 11217099 Gso7g1995 7 44002505 44007359 PCT
Gso9g0276 9 2666106 2673551 Gso7g1995 7 44002505 44007359 PCT