Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1150 ATGGTAGCAGCTTCCCCAATCTCGATTCGAAGCGAAAAGATTTCACCCATTGACCTTCCCATGGTGGACCTAACCGGGGAAAGATCAATGGTGAAAAAACTCATTGTGAAGGCTTGTGAGGAGTATGGTTTCTTCAACGTGATTAACCATGGCGTCCCCCGCGACACCATAGCCAAAATGGAAGAAGCAGCTTTTGATTTCTTTGCCAAACCAATGGCCCAAAAGAAACAAGTTGCCCTTTATGGCTGCAAGAACATAGGCTTCAATGGAGACATGGGTGAGGTCGAGTACCTTCTCCTCAGTGCTACTCCTCCCTCTGTTGCTCACTTAAAAAACATCTCCAATGTGCCATCAAACTTCAGCTCTAGTGTGAGTGCATACACAGAAGGTGTGAGGGAGCTGGCATGTGAGATTTTGGAGCTAATGGCAGAGGGTCTGGGGGTCCCGGATACATGGTTTTTCAGCAGGTTGATCAGGGAGGTTGACAGTGACTCAGTCCTGAGGTTCAATCACTACCCACCTATTATACTTAACAAAGACTGCTTCAAGGACAACCACAACCACACCAAGGTCATTGGCTTTGGGGAGCATTCTGACCCTCAGATTCTTACCATCCTCAGATCCAACGACGTACCTGGCCTCCAAATCTCTCTTCAAGATGGCGTGTGGAACCCAGTTGCCCCTGACCCCTCAGCTTTCTGTGTTAATGTGGGTGATCTCTTACAGGTTATGACAAATGGGAGATTTTTGAGCGTGAGACACAGGGCCATGACCAACTCACACAAGTCTAGAATGTCGGTGGCATATTTTGGTGGTCCACCACTTGATGCATGCATTGTTGCTCCCCCAGTTATGGTTACATCCAAGAGGCCCTCCCTCCTCTTCAAGCCATTCACTTGGGCTGAATACAAGAAAGTCACCTATTCTATGAAGCTTGGAGAACGCCGCATTGACTTTTTCAGGAAGTGCACTACGCAGCAGCAAATAGAGTAA 993 0.4783 MVAASPISIRSEKISPIDLPMVDLTGERSMVKKLIVKACEEYGFFNVINHGVPRDTIAKMEEAAFDFFAKPMAQKKQVALYGCKNIGFNGDMGEVEYLLLSATPPSVAHLKNISNVPSNFSSSVSAYTEGVRELACEILELMAEGLGVPDTWFFSRLIREVDSDSVLRFNHYPPIILNKDCFKDNHNHTKVIGFGEHSDPQILTILRSNDVPGLQISLQDGVWNPVAPDPSAFCVNVGDLLQVMTNGRFLSVRHRAMTNSHKSRMSVAYFGGPPLDACIVAPPVMVTSKRPSLLFKPFTWAEYKKVTYSMKLGERRIDFFRKCTTQQQIE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1150 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 273 IPR005123 -
Gso15g1150 330 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 322 - -
Gso15g1150 330 SUPERFAMILY Clavaminate synthase-like 11 313 - -
Gso15g1150 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 79 IPR026992 -
Gso15g1150 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 322 - -
Gso15g1150 330 Gene3D - 3 312 IPR027443 -
Gso15g1150 330 Pfam 2OG-Fe(II) oxygenase superfamily 164 271 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1150 Gso-Chr15 11196922 11217099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1150 10 321 Glycosyltransferase AT5G59530 27.381 3.11e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1150 K04125 - gmx:100811043 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1150 15 11196922 11217099 Gso9g0276 9 2666106 2673551 GST
Gso7g1995 7 44002505 44007359 Gso15g1150 15 11196922 11217099 PCT
Gso17g0308 17 2728231 2733392 Gso15g1150 15 11196922 11217099 PCT
Gso15g1150 15 11196922 11217099 Gso7g1995 7 44002505 44007359 PCT
Gso15g1150 15 11196922 11217099 Gso17g0308 17 2728231 2733392 PCT