Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2710 ATGAATGTTCTGGCTCTAGGGCGCTTCCTCACTTCCCCCTTATATAAGTCTTCCCCTCTCACTCCCTCCCCAATCCAATTCACACCCATTTTTCTTCATCCCCCAAAGTTTCAATCTTTGTATTCAATTCACCCTTTCTCTCTCTCCATGGCCACTTGTGTTGATGCCTCAACCCCTCTTTCTCGGAAACCTAACGGGTCCCAATCCGATGATCATTCCTTTAATTACATGAAATTCTGCCGACCCTCTTTCTCTGATCGCGTTCCCTGCATGCCCATTTGCAAGAATCGCGACACCGCCTTCACACGTGTGGAGGAGTTTGACACACGTGTGGAGAATCATGTTGAGGTTGACGTTGTAGAGGGTGTTGATCTTTGGTTGAAGATTCAAGAGGAAGCAAGGTTAGATGTTGATCAAGAACCAATCTTATCCAGCTACTATTTCAGTTCCATTTTGTCTCACAAATCCTTGGAGAGTGCCTTGGCCAACCACCTCTCCACAAATTTGAGCAGCTTGAGCCTTCCAAGCAGCACCCTTTATGACCTTTTCATGGGTGTTTTTGCCGATGATAATGACATCATAGGTGCTGTCAAAGATGATTTGATAGCTGTTAAGGAGAGGGACCCTGCTTGCATAAGTTATGTGCATTGCTTGTTGAATTTCAAGGGTTTCTTGGCATGCCAGGCTCATAGGATTGCTCACAAATTGTGGCTCCAAGGGAGGAAGGTCTTGGCACTGTTGATTCAGAATAGGGTTTCTGATGTTTTTGCTGTGGATATTCACCCTGGTGCGAAAATTGGACGTGGGATTTTGCTGGATCATGCAACAGGACTTGTTGTGGGGGAGACTGCAGTTATTGGGAATAATGTGTCAATTTTGCATAATGTGACATTGGGAGGGACTGGTAAGGCTAGTGGGGATAGACACCCTAAGATTGGTGATGGGGTGTTGATAGGTGCAGGGACTTGTATTTTGGGGAACATTAAGATTGGTGATGGAGCTAAGATTGGTGCATGTTCTGTTGTGTTGAAGGAAGTGCCACCAAGAACTACTGCTGTTGGGAACCCTGCTAGGTTGGTTGGAGGGAAGGATAACCCTATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATGGTCTGATTATGTTATCTAG 1164 0.4527 MNVLALGRFLTSPLYKSSPLTPSPIQFTPIFLHPPKFQSLYSIHPFSLSMATCVDASTPLSRKPNGSQSDDHSFNYMKFCRPSFSDRVPCMPICKNRDTAFTRVEEFDTRVENHVEVDVVEGVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANHLSTNLSSLSLPSSTLYDLFMGVFADDNDIIGAVKDDLIAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSDVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSWSDYVI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2710 387 PANTHER SERINE ACETYLTRANSFERASE 50 387 - -
Gso8g2710 387 Pfam Bacterial transferase hexapeptide (six repeats) 309 343 IPR001451 -
Gso8g2710 387 PANTHER SERINE ACETYLTRANSFERASE 50 387 - -
Gso8g2710 387 SUPERFAMILY Trimeric LpxA-like enzymes 122 361 IPR011004 -
Gso8g2710 387 Gene3D serine acetyltransferase, domain 1 111 258 IPR042122 -
Gso8g2710 387 SMART SATase_N_2_a 125 229 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso8g2710 387 Gene3D Hexapeptide repeat proteins 259 378 - -
Gso8g2710 387 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 318 346 IPR018357 GO:0016740
Gso8g2710 387 TIGRFAM cysE: serine O-acetyltransferase 197 358 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso8g2710 387 CDD LbH_SAT 256 356 IPR045304 -
Gso8g2710 387 Pfam Serine acetyltransferase, N-terminal 125 229 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2710 Gso-Chr8 44761912 44763625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2710 125 385 Miscellaneous Gene Families AT2G17640 52.490 2.58e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2710 K00640 - gmx:100779106 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2710 8 44761912 44763625 Gso8g2710 8 44761912 44763625 ECH
Gso18g0676 18 7617045 7618605 Gso8g2710 8 44761912 44763625 GST
Gso8g2710 8 44761912 44763625 Gso14g0127 14 1118475 1120025 PCT
Gso8g2710 8 44761912 44763625 Gso2g2540 2 49764467 49766023 PCT
Gso14g0127 14 1118475 1120025 Gso8g2710 8 44761912 44763625 PCT
Gso2g2540 2 49764467 49766023 Gso8g2710 8 44761912 44763625 PCT