Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0127 ATGATGAGAAGGCGTTCCCTTGTGACTGCATCACCAAAACAAGGGTCCGTCTTCTTTGTTGGCCACGACAACAACCCAACAATTCATCCTCACACTCACACCCTTCTGACTCCATCACCAAAACAAGTCACAGAAAACCATAATCACTCCAAAACCTTCAAACCCAGTTCCAATCACAACAGGGTCAACACCTTGCACACTGGTTCCACCGTACAACATGTTGAAGCGGATGAGGCCGTTGAACTGGATGTGTTGTGGACGAAGATGCAGGAAGAAGCCAAACTCGATGTCACTGTGGAACCCTTTTTGTCTGATTACTACAACACTTCCATTCTCTCTCACAACTCACTGCAAACCGCGTTGGCCAATCACCTTGCCATGAAACTCAGCAACTCAAGCCTCCCAAGCAGCATACTTTCTGATCTTTTTGTGACGGTTTTGGAGACTGATAAATCCATCATGGATGCTGTGAAGAGTGATCTGAGAGTGGTGAAGGAGCTAGACCCTGCTTGCATAAGCCACGTGCACTGCTTCTTGAACTTCAAAGGCTTTCTGGCGTGCCAGGCTCACAGGGTGGCTCACAAGCTATGGCTTCAGGGAAGGAAGATTCTTGCTGTGACGATTCAGAACCGGGTTTCCCAGGTTTTCGCGGTGGATGTTCATCCGGGGGCTAGGATTGGAAGTGGGATTTTGCTGGATCATGCGACTGGTATTGTGGTGGGAGAGACTGCTGTGATAGGGAACAATGTGCCAATTCTGCATGGTGTCACTTTGGGAGGGACTGGTAAGGTTTCTGGGGACAGGCACCCAAAGATTGGTGATGGGGTGCTGATTGGTGCTGGAACTTGTATCTTGGGGAATATTAAGGTTGGTGATGGGGCCAAGATTGGTGCTGGTTCTGTGGTTATTAAGGATGTTCCTCCAAGGACTACTGTTGTCGGGAACCCAGCAAAGCTGGTAGGAGGGAAGAACAGCTCTGTTAAGTTGGATAAGATTCCTATCTTCACCATGGACCATACTTCACATATTGCTGACTTTTATGATTATTGTGTTTAG 1056 0.4801 MMRRRSLVTASPKQGSVFFVGHDNNPTIHPHTHTLLTPSPKQVTENHNHSKTFKPSSNHNRVNTLHTGSTVQHVEADEAVELDVLWTKMQEEAKLDVTVEPFLSDYYNTSILSHNSLQTALANHLAMKLSNSSLPSSILSDLFVTVLETDKSIMDAVKSDLRVVKELDPACISHVHCFLNFKGFLACQAHRVAHKLWLQGRKILAVTIQNRVSQVFAVDVHPGARIGSGILLDHATGIVVGETAVIGNNVPILHGVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNSSVKLDKIPIFTMDHTSHIADFYDYCV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0127 351 Pfam Serine acetyltransferase, N-terminal 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso14g0127 351 SMART SATase_N_2_a 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso14g0127 351 Gene3D serine acetyltransferase, domain 1 68 218 IPR042122 -
Gso14g0127 351 Gene3D Hexapeptide repeat proteins 219 340 - -
Gso14g0127 351 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 48 350 - -
Gso14g0127 351 TIGRFAM cysE: serine O-acetyltransferase 157 318 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso14g0127 351 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 278 306 IPR018357 GO:0016740
Gso14g0127 351 MobiDBLite consensus disorder prediction 42 61 - -
Gso14g0127 351 Pfam Bacterial transferase hexapeptide (six repeats) 269 303 IPR001451 -
Gso14g0127 351 SUPERFAMILY Trimeric LpxA-like enzymes 85 321 IPR011004 -
Gso14g0127 351 CDD LbH_SAT 216 316 IPR045304 -
Gso14g0127 351 PANTHER SERINE ACETYLTRANSFERASE 48 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0127 Gso-Chr14 1118475 1120025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0127 83 347 Miscellaneous Gene Families AT2G17640 51.661 2.11e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0127 K00640 - gmx:100806181 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0127 14 1118475 1120025 Gso2g2540 2 49764467 49766023 GST
Gso18g0676 18 7617045 7618605 Gso14g0127 14 1118475 1120025 PCT
Gso8g2710 8 44761912 44763625 Gso14g0127 14 1118475 1120025 PCT
Gso14g0127 14 1118475 1120025 Gso18g0676 18 7617045 7618605 PCT
Gso14g0127 14 1118475 1120025 Gso8g2710 8 44761912 44763625 PCT