Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1236 ATGCTGGGCTATGATGATGACGATATCGATGTGTTCTTTGACTCAGTGGATAGTTTGTCAGCTCAAGATTCTGTTTTAGGCAAAGAAGGGTTTGATTCTGAAAGGTGTGGTTATGACGAAATTTGGGTGAAGGAGCCTGTTAGTGTGAAGGAGAGGAGGGAACGTTTTCTGCAGGGTTTGGGTTTAGCTGATGCTGCTTCCAAGGTTTGTTCACAAGAGAAAATGAGCTTTGATGATTCGTCCATCAGCTTGGGATTGGAGAGGATCAGGGAGTGCAGTGGGGCAATCTCAAATGCTTGCATTTTGCATACTGATCCAGTAGTATCTGAGAAGTTGATTCTCTCAGGAGGCAAAGCAGCTTCTGAAGAAAAAGTCTATTTGGATGAAGTGAAAGGGTGTTCCCAAGATGAAGCAGATGCAAACTTTCAAGGGAAAGTGCATGAGTTCTCTTCTACAGCTGAGGAGCACAGACCCAGAGAAGCTGATTCACAAGAAGAATTTCAGGATTTTAATATGAGTAAAAGAAAGAGGAAAAACTGGTGGAAGCGCTTTGTGAACATCAGGAAAGGCGGTGAAGGAAATGCAGGGACAAATAAAACTCGAAGAATAAAGGTGAGGCAGAATAAAAAGAGGTGGCTGGAGTTCAGTGGCCTATACCTTGGACAAGAGGTTAGAGCACACAAAGGCCTAATCTGGAAAATGAAATTTAGTCCCTGTGGTCAGTATTTAGCAAGTGGAGGTGAAGATGGTGTTGTTTGCATATGGCGTGTTACATCACTGGATAAGTCCAGTATTTGTTCCACCACAGAAGACAGTACTTCTAATAGTAAAGTGGAATGTGACAACTCTTCTCCTCGGAACAAACACTCAAGTCAACCCTTCATTTTCCTTCCAAATAGTATTTTTCAAATTGAGGAATCACCACTGCAAGAATTCTTTGGTCATTCCAGTGATGTCTTGGATTTGGCTTGGTCTAATTCAGATATTCTCCTTTCATCTTCTATGGACAAGACTGTCCGCTTGTGGCAAATTGGTTGTAATCAATGTCTAAATGTTTTCCATCACAATGACTATGCAGTGACATGCATTCAGTTCAACCCTGTTGATGAAAATTACTTCATTAGTGGGTCCATTGATGGTAAGGTTCGAATATGGGGGATACGTGAAGAGCGAGTTATTGACTGGGCAGATATACGAGATGTCATAAGTGCTATAAGTTACCAGCAAGATGGGAAAGGATTTGTAGTTGGTTCTGTTACAGGCACTTGTTGTTTTTATGTTGCTTCTGGAACATATTTCCAGCTTGAGGCACAGATAGATGTCCATGGAAAAAAGAAAGTGTCAGGCAACAAGATTACCGGCATTCAGTTCTCCCAAAAAAACAGTCAGAGAATAATGATCACATCAGAAGATTCTAAAATTTGTATATTTGATGGCACTGAGCTTGTTCAGAAATACAAAGGTCTTCCTAAGTCAGGAAGTCAGATGTCTGGTTCATTTACATCAAGTGGAAAAAATATAATCTCAGTTGGAGAGGACTCCCATGTATATATTTGGAACTTTGATGACATGGGAAATGCTTCTTCGAAACAGACGAAATCTGAACGCTCCTGTGAGTACTTTTTCTCTAAAGGTGTTACTGTTGCAATACCTTGGTCAGGAATGAAAGCAGATCAAAGGGACTCTAGTGGTAATTATTCCCACCGTTCTTCAGAAATGCCAACCCAACAGCTAGAGGTTGCCCCTGAGACTAGAGATCACGAACTTTTTTCTCTTGGTAATTGGTTCGCCACTGATGGCTCGTGTCGAGGTTCTATGACTTGGCCTGAGGAGAAACTTCCTAGCTGGGATTTACCTATAGCAGAAGAAGACCAGCAGTTATCTCACAAAGATAATTGCCATGACAGAAGTGTATCAGAAACATGGGGACTATCAATTGTGGCAGCTGGTTGTGATGGAACTATCAAGACATTCCACAACTTTGGATTGCCCGTTAGGCTTTAA 2004 0.4152 MLGYDDDDIDVFFDSVDSLSAQDSVLGKEGFDSERCGYDEIWVKEPVSVKERRERFLQGLGLADAASKVCSQEKMSFDDSSISLGLERIRECSGAISNACILHTDPVVSEKLILSGGKAASEEKVYLDEVKGCSQDEADANFQGKVHEFSSTAEEHRPREADSQEEFQDFNMSKRKRKNWWKRFVNIRKGGEGNAGTNKTRRIKVRQNKKRWLEFSGLYLGQEVRAHKGLIWKMKFSPCGQYLASGGEDGVVCIWRVTSLDKSSICSTTEDSTSNSKVECDNSSPRNKHSSQPFIFLPNSIFQIEESPLQEFFGHSSDVLDLAWSNSDILLSSSMDKTVRLWQIGCNQCLNVFHHNDYAVTCIQFNPVDENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGKGFVVGSVTGTCCFYVASGTYFQLEAQIDVHGKKKVSGNKITGIQFSQKNSQRIMITSEDSKICIFDGTELVQKYKGLPKSGSQMSGSFTSSGKNIISVGEDSHVYIWNFDDMGNASSKQTKSERSCEYFFSKGVTVAIPWSGMKADQRDSSGNYSHRSSEMPTQQLEVAPETRDHELFSLGNWFATDGSCRGSMTWPEEKLPSWDLPIAEEDQQLSHKDNCHDRSVSETWGLSIVAAGCDGTIKTFHNFGLPVRL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 265 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 432 478 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 346 386 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 388 427 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 479 520 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 305 343 IPR001680 GO:0005515
Gso8g1236 667 SMART WD40_4 217 256 IPR001680 GO:0005515
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 312 344 - -
Gso8g1236 667 MobiDBLite consensus disorder prediction 558 578 - -
Gso8g1236 667 MobiDBLite consensus disorder prediction 267 291 - -
Gso8g1236 667 Gene3D - 216 548 IPR015943 GO:0005515
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 259 - -
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 353 395 IPR001680 GO:0005515
Gso8g1236 667 PANTHER WD REPEAT DOMAIN 44 1 667 IPR040324 -
Gso8g1236 667 MobiDBLite consensus disorder prediction 556 582 - -
Gso8g1236 667 SUPERFAMILY WD40 repeat-like 218 657 IPR036322 GO:0005515
Gso8g1236 667 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 1 667 - -
Gso8g1236 667 Pfam WD domain, G-beta repeat 307 342 IPR001680 GO:0005515
Gso8g1236 667 Pfam WD domain, G-beta repeat 348 385 IPR001680 GO:0005515
Gso8g1236 667 Pfam WD domain, G-beta repeat 223 255 IPR001680 GO:0005515
Gso8g1236 667 PRINTS G protein beta WD-40 repeat signature 243 257 IPR020472 -
Gso8g1236 667 PRINTS G protein beta WD-40 repeat signature 330 344 IPR020472 -
Gso8g1236 667 PRINTS G protein beta WD-40 repeat signature 373 387 IPR020472 -
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 352 IPR001680 GO:0005515
Gso8g1236 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 353 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1236 Gso-Chr8 11347625 11353364 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1236 K20241 - gmx:100806747 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1614 5 39459385 39465392 Gso8g1236 8 11347625 11353364 GST
Gso8g1236 8 11347625 11353364 Gso4g1804 4 48245868 48254556 PCT
Gso8g1236 8 11347625 11353364 Gso6g1272 6 12408962 12418066 PCT
Gso4g1804 4 48245868 48254556 Gso8g1236 8 11347625 11353364 PCT
Gso6g1272 6 12408962 12418066 Gso8g1236 8 11347625 11353364 PCT